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由SopA和SopB的动态定位介导的F质粒的亚细胞定位。

Subcellular positioning of F plasmid mediated by dynamic localization of SopA and SopB.

作者信息

Adachi Shun, Hori Kotaro, Hiraga Sota

机构信息

Department of Radiation Genetics, Graduate School of Medicine, Kyoto University, Konoe-cho, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan.

出版信息

J Mol Biol. 2006 Mar 3;356(4):850-63. doi: 10.1016/j.jmb.2005.11.088. Epub 2005 Dec 20.

Abstract

SopA, SopB proteins and the cis-acting sopC DNA region of F plasmid are essential for partitioning of the plasmid, ensuring proper subcellular positioning of the plasmid DNA molecules. We have analyzed by immunofluorescence microscopy the subcellular localization of SopA and SopB. The majority of SopB molecules formed foci, which localized frequently with F plasmid DNA molecules. The foci increased in number in proportion to the cell length. Interestingly, beside the foci formation, SopB formed a spiral structure that was dependent on SopA, which also formed a spiral structure, independent of the presence of SopB, and these two structures partially overlapped. On the basis of these results and previous biochemical studies together with our simulations, we propose a theoretical model named "the reaction-diffusion partitioning model", using reaction-diffusion equations that explain the dynamic subcellular localization of SopA and SopB proteins and the subcellular positioning of F plasmid. We hypothesized that sister copies of plasmid DNA compete with each other for sites at which SopB multimer is at the optimum concentration. The plasmid incompatibility mediated by the Sop system might be explained clearly by this hypothesis.

摘要

F质粒的SopA、SopB蛋白以及顺式作用的sopC DNA区域对于质粒的分配至关重要,可确保质粒DNA分子在亚细胞中的正确定位。我们通过免疫荧光显微镜分析了SopA和SopB的亚细胞定位。大多数SopB分子形成焦点,这些焦点经常与F质粒DNA分子定位在一起。焦点的数量随着细胞长度的增加而增加。有趣的是,除了形成焦点外,SopB还形成了一种依赖于SopA的螺旋结构,SopA也形成了一种螺旋结构,且与SopB的存在无关,这两种结构部分重叠。基于这些结果、先前的生化研究以及我们的模拟,我们使用反应扩散方程提出了一个名为“反应扩散分配模型”的理论模型,该模型解释了SopA和SopB蛋白的动态亚细胞定位以及F质粒的亚细胞定位。我们假设质粒DNA的姐妹拷贝相互竞争SopB多聚体处于最佳浓度的位点。由Sop系统介导的质粒不相容性可能可以通过这个假设得到清晰的解释。

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