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采用扭转路径积分方法对水合去甲肾上腺素类似物进行量子模拟。

Quantum simulation of a hydrated noradrenaline analog with the torsional path integral method.

作者信息

Miller Thomas F, Clary David C

机构信息

Physical and Theoretical Chemistry Laboratory, Oxford University, South Parks Road, Oxford OX1 3QZ, UK.

出版信息

J Phys Chem A. 2006 Jan 19;110(2):731-40. doi: 10.1021/jp055108l.

Abstract

An extended version of the torsional path integral Monte Carlo (TPIMC) method is presented and shown to be useful for studying the conformation of flexible molecules in solvated clusters. The new technique is applied to the hydrated clusters of the 2-amino-1-phenyl-ethanol (APE) molecule. APE + nH2O clusters with n = 0-4 are studied at 100 and 300 K using both classical and quantum simulations. Only at the lower temperature is the hydration number n found to impact the conformational distribution of the APE molecule. This is shown to be a result of the temperature-dependent balance between the internal energy and entropy contributions to the relative conformer free energies. Furthermore, at 100 K, large quantum effects are observed in the calculated conformer populations. A particularly large quantum shift of 30% of the total population is calculated for the APE + 2H2O cluster, which is explained in terms of the relative zero point energy of the lowest-energy hydrated structures for this cluster. Finally, qualitative agreement is found between the reported calculations and recent spectroscopy experiments on the hydrated clusters of APE, including an entropically driven preference for the formation of AG-type hydrated structures and the formation of a water "droplet" in the APE + 4H2O cluster.

摘要

本文提出了一种扭转路径积分蒙特卡罗(TPIMC)方法的扩展版本,并证明其对研究溶剂化簇中柔性分子的构象很有用。新技术应用于2-氨基-1-苯基乙醇(APE)分子的水合簇。使用经典和量子模拟在100 K和300 K下研究了n = 0-4的APE + nH₂O簇。仅在较低温度下,才发现水合数n会影响APE分子的构象分布。这表明这是内能和熵对相对构象自由能贡献之间温度依赖性平衡的结果。此外,在100 K时,在计算的构象体种群中观察到较大的量子效应。对于APE + 2H₂O簇,计算出总种群的30%有特别大的量子位移,这是根据该簇最低能量水合结构的相对零点能量来解释的。最后,在报道的计算结果与最近关于APE水合簇的光谱实验之间发现了定性一致性,包括对AG型水合结构形成的熵驱动偏好以及APE + 4H₂O簇中形成水“液滴”。

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