Graether Steffen P, Slupsky Carolyn M, Sykes Brian D
CIHR Group in Protein Structure and Function, Department of Biochemistry and Protein Engineering Network of Centres of Excellence, University of Alberta, Edmonton, Canada.
Proteins. 2006 May 15;63(3):603-10. doi: 10.1002/prot.20889.
One strategy of psychrophilic organisms to survive subzero temperature is to produce antifreeze protein (AFPs), which inhibit the growth of macromolecular ice. To better understand the binding mechanism, the structure and dynamics of several AFPs have been studied by nuclear magnetic resonance (NMR) and X-ray crystallography. The results have shown that different organisms can use diverse structures (alpha-helix, beta-helix, or different globular folds) to achieve the same function. A number of studies have focused on understanding the relationship between the alpha-helical structure of fish type I AFP and its function as an inhibitor of ice growth. The results have not explained whether the 90% activity loss caused by the conservative mutation of two threonines to serines (Thr13Ser/Thr24Ser) is attributable to a change in protein structure in solution or in ice. We examine here the structure and dynamics of the winter flounder type I AFP and the mutant Thr13Ser/Thr24Ser in both solution and solid states using a wide range of NMR approaches. Both proteins remain fully alpha-helical at all temperatures and in ice, demonstrating that the activity change must therefore not be attributable to changes in the protein fold or dynamics but differences in surface properties.
嗜冷生物在零下温度下生存的一种策略是产生抗冻蛋白(AFP),这种蛋白能抑制大分子冰的生长。为了更好地理解其结合机制,已经通过核磁共振(NMR)和X射线晶体学研究了几种抗冻蛋白的结构和动力学。结果表明,不同的生物可以利用不同的结构(α螺旋、β螺旋或不同的球状折叠)来实现相同的功能。许多研究集中在理解鱼类I型抗冻蛋白的α螺旋结构与其作为冰生长抑制剂的功能之间的关系。结果尚未解释由两个苏氨酸保守突变为丝氨酸(Thr13Ser/Thr24Ser)导致的90%活性丧失是归因于溶液中还是冰中的蛋白质结构变化。我们在这里使用广泛的核磁共振方法研究了冬季比目鱼I型抗冻蛋白及其突变体Thr13Ser/Thr24Ser在溶液和固态中的结构和动力学。两种蛋白质在所有温度下和在冰中都保持完全α螺旋结构,这表明活性变化因此一定不是归因于蛋白质折叠或动力学的变化,而是表面性质的差异。