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利用方差分量法进行酗酒基因的遗传印记分析。

Genetic imprinting analysis for alcoholism genes using variance components approach.

机构信息

Department of Epidemiology, Unit 1340, University of Texas M. D. Anderson Cancer Center, 1155 Hermann Pressler Boulevard, Houston, TX 77030, USA.

出版信息

BMC Genet. 2005 Dec 30;6 Suppl 1(Suppl 1):S161. doi: 10.1186/1471-2156-6-S1-S161.

DOI:10.1186/1471-2156-6-S1-S161
PMID:16451623
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1866772/
Abstract

Genomic imprinting, which is also known as the parent-of-origin effect, is a mechanism that only expresses one copy of a gene pair depending upon the parental origin. Although many chromosomal regions in the human genome are likely to be imprinted, imprinting is not accounted for in the usual linkage analysis. In this study, using a variance-components approach with a quantitative phenotype ttth-FP1, we found significant evidence of imprinting at two loci, D7S1790 and D1S1631, on chromosome 1 and chromosome 7, respectively. Our results suggest that allowing for the possibility of imprinting can increase the power to detect linkage for localizing genes for alcoholism.

摘要

基因组印记,也称为亲本来源效应,是一种仅根据亲本来源表达基因对的一个副本的机制。尽管人类基因组中的许多染色体区域可能被印记,但印记在通常的连锁分析中并不考虑。在这项研究中,我们使用具有定量表型 ttth-FP1 的方差分量方法,在 1 号染色体和 7 号染色体上的 D7S1790 和 D1S1631 两个基因座上发现了印记的显著证据。我们的研究结果表明,考虑到印记的可能性可以提高检测酗酒基因定位的连锁能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aebd/1866772/e9c830f728b1/1471-2156-6-S1-S161-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aebd/1866772/e9c830f728b1/1471-2156-6-S1-S161-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aebd/1866772/e9c830f728b1/1471-2156-6-S1-S161-1.jpg

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本文引用的文献

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Hum Hered. 2005;59(1):26-33. doi: 10.1159/000084734. Epub 2005 Mar 30.
2
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Ann Hum Genet. 2005 Jan;69(Pt 1):113-26. doi: 10.1046/j.1529-8817.2004.00139.x.
3
Affected-sib-pair test for linkage based on constraints for identical-by-descent distributions corresponding to disease models with imprinting.
基于与具有印记的疾病模型相对应的同源等位基因分布约束的连锁受累同胞对检验。
Genet Epidemiol. 2004 May;26(4):273-85. doi: 10.1002/gepi.10320.
4
Linkage analysis of adult height with parent-of-origin effects in the Framingham Heart Study.弗雷明汉心脏研究中成人身高与亲本来源效应的连锁分析。
BMC Genet. 2003 Dec 31;4 Suppl 1(Suppl 1):S76. doi: 10.1186/1471-2156-4-S1-S76.
5
Effect of winsorization on power and type 1 error of variance components and related methods of QTL detection.缩尾处理对方差分量的检验功效及一类错误以及数量性状基因座检测相关方法的影响。
Behav Genet. 2004 Mar;34(2):153-9. doi: 10.1023/B:BEGE.0000013729.26354.da.
6
Genomic imprinting and linkage test for quantitative-trait Loci in extended pedigrees.扩展家系中数量性状基因座的基因组印记与连锁检测
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