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葡萄糖与来自大肠杆菌的D-半乳糖/D-葡萄糖结合蛋白的结合可恢复天然蛋白质的二级结构和热稳定性,这些在钙耗尽时会丧失。

Binding of glucose to the D-galactose/D-glucose-binding protein from Escherichia coli restores the native protein secondary structure and thermostability that are lost upon calcium depletion.

作者信息

D'Auria Sabato, Ausili Alessio, Marabotti Anna, Varriale Antonio, Scognamiglio Viviana, Staiano Maria, Bertoli Enrico, Rossi Mosè, Tanfani Fabio

机构信息

Istituto di Biochimica delle Proteine, CNR, Via P. Castellino, 111 80131 Napoli, Italy.

出版信息

J Biochem. 2006 Feb;139(2):213-21. doi: 10.1093/jb/mvj027.

Abstract

The effect of the depletion of calcium on the structure and thermal stability of the D-galactose/D-glucose-binding protein (GGBP) from Escherichia coli was studied by fluorescence spectroscopy and Fourier-transform infrared spectroscopy. The calcium-depleted protein (GGBP-Ca) was also studied in the presence of glucose (GGBP-Ca/Glc). The results show that calcium depletion has a small effect on the secondary structure of GGBP, and, in particular it affects a population of alpha-helices with a low exposure to solvent. Alternatively, glucose-binding to GGBP-Ca eliminates the effect induced by calcium depletion by restoring a secondary structure similar to that of the native protein. In addition, the infrared and fluorescence data obtained reveal that calcium depletion markedly reduces the thermal stability of GGBP. In particular, the spectroscopic experiments show that the depletion of calcium mainly affects the stability of the C-terminal domain of the protein. However, the binding of glucose restores the thermal stability of GGBP-Ca. The thermostability of GGBP and GGBP-Ca was also studied by molecular dynamics simulations. The simulation data support the spectroscopic results. New insights into the role of calcium in the thermal stability of GGBP contribute to a better understanding of the protein function and constitute important information for the development of biotechnological applications of this protein. Mutations and/or labelling of amino acid residues located in the protein C-terminal domain may affect the stability of the whole protein structure.

摘要

通过荧光光谱法和傅里叶变换红外光谱法研究了钙缺失对大肠杆菌D-半乳糖/D-葡萄糖结合蛋白(GGBP)结构和热稳定性的影响。还研究了在葡萄糖存在下的钙缺失蛋白(GGBP-Ca)(GGBP-Ca/Glc)。结果表明,钙缺失对GGBP的二级结构影响较小,尤其影响了一群溶剂暴露度低的α-螺旋。另外,葡萄糖与GGBP-Ca结合通过恢复与天然蛋白相似的二级结构消除了钙缺失诱导的影响。此外,获得的红外和荧光数据表明,钙缺失显著降低了GGBP的热稳定性。特别地,光谱实验表明,钙缺失主要影响该蛋白C端结构域的稳定性。然而,葡萄糖的结合恢复了GGBP-Ca的热稳定性。还通过分子动力学模拟研究了GGBP和GGBP-Ca的热稳定性。模拟数据支持光谱结果。对钙在GGBP热稳定性中作用的新见解有助于更好地理解该蛋白的功能,并为该蛋白生物技术应用的开发构成重要信息。位于蛋白C端结构域的氨基酸残基的突变和/或标记可能会影响整个蛋白结构的稳定性。

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