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采用凝集素微阵列方法分析动态细菌糖组。

Analyzing the dynamic bacterial glycome with a lectin microarray approach.

作者信息

Hsu Ku-Lung, Pilobello Kanoelani T, Mahal Lara K

机构信息

Department of Chemistry and Biochemistry, Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, University of Texas at Austin, 1 University Station, A5300, Austin, Texas 78712-0265, USA.

出版信息

Nat Chem Biol. 2006 Mar;2(3):153-7. doi: 10.1038/nchembio767. Epub 2006 Feb 5.

Abstract

Glycosylation of bacterial cell surfaces is emerging as a critical factor in symbiosis, pathogenesis, cell-cell interactions and immune evasion. The lack of high-throughput analytical tools to examine bacterial glycans has been a major obstacle to the field and has hindered closer examination of the dynamics of carbohydrate variation. We have recently developed a lectin microarray for the analysis of glycoproteins. Herein we present a rapid analytical system based on this technology for the examination of bacterial glycans. The glycosylation pattern observed distinguishes closely related Escherichia coli strains from one another, providing a facile means of fingerprinting bacteria. In addition, dynamic alterations in the carbohydrate coat of a pathogenic E. coli strain are readily observed. The fast evaluation of real-time alterations in surface-carbohydrate epitopes allows examination of the dynamic role of bacterial sugars in response to external stimuli such as the immune system.

摘要

细菌细胞表面的糖基化正成为共生、发病机制、细胞间相互作用和免疫逃逸中的关键因素。缺乏用于检测细菌聚糖的高通量分析工具一直是该领域的主要障碍,并阻碍了对碳水化合物变异动态的更深入研究。我们最近开发了一种用于分析糖蛋白的凝集素微阵列。在此,我们展示了一种基于该技术的快速分析系统,用于检测细菌聚糖。观察到的糖基化模式能够区分密切相关的大肠杆菌菌株,为细菌指纹识别提供了一种简便方法。此外,很容易观察到致病性大肠杆菌菌株碳水化合物包膜的动态变化。对表面碳水化合物表位实时变化的快速评估,有助于研究细菌糖类在应对免疫系统等外部刺激时的动态作用。

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