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Rhox 同源框基因簇:三个家族成员的近期复制

Rhox homeobox gene cluster: recent duplication of three family members.

作者信息

MacLean James A, Lorenzetti Diego, Hu Zhiying, Salerno Will J, Miller Jonathan, Wilkinson Miles F

出版信息

Genesis. 2006 Mar;44(3):122-9. doi: 10.1002/gene.20193.

DOI:10.1002/gene.20193
PMID:16496311
Abstract

We recently reported the discovery of a homeobox gene cluster on the mouse X chromosome, Rhox, whose 12 members are selectively expressed in specific cell types in reproductive organs. Here we report the existence of 20 additional Rhox homeobox genes in this gene cluster. Most of the newly identified Rhox paralogs retain the same order and relative orientation as three of the originally described Rhox genes, suggesting that they arose from recent duplications of this trimer unit. Many of these new Rhox family members are expressed in the testis and placenta. Analysis of synonymous and nonsynonymous substitutions in their homeodomain region suggests that these new Rhox paralogs duplicated so recently that their encoded proteins have not yet acquired distinct DNA-binding specificities. The existence of these new Rhox genes provides an opportunity to examine the initial stages of gene cluster evolution.

摘要

我们最近报道了在小鼠X染色体上发现了一个同源框基因簇Rhox,其12个成员在生殖器官的特定细胞类型中选择性表达。在此,我们报道该基因簇中另外存在20个Rhox同源框基因。大多数新鉴定出的Rhox旁系同源基因与最初描述的三个Rhox基因保持相同的顺序和相对方向,这表明它们源于该三聚体单元最近的复制。这些新的Rhox家族成员中有许多在睾丸和胎盘中表达。对其同源结构域区域同义替换和非同义替换的分析表明,这些新的Rhox旁系同源基因复制时间很近,以至于它们编码的蛋白质尚未获得独特的DNA结合特异性。这些新Rhox基因的存在为研究基因簇进化的初始阶段提供了一个机会。

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引用本文的文献

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Mammal Reproductive Homeobox (Rhox) Genes: An Update of Their Involvement in Reproduction and Development.哺乳动物生殖同源盒(Rhox)基因:其在生殖和发育中作用的最新研究进展。
Genes (Basel). 2023 Aug 25;14(9):1685. doi: 10.3390/genes14091685.
2
Rhox8 homeobox gene ablation leads to rete testis abnormality and male subfertility in mice†.Rhox8 同源盒基因缺失导致小鼠的曲细精管异常和雄性生育力下降。
Biol Reprod. 2023 Oct 13;109(4):520-532. doi: 10.1093/biolre/ioad077.
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Expansion of gene clusters, circular orders, and the shortest Hamiltonian path problem.
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J Math Biol. 2018 Aug;77(2):313-341. doi: 10.1007/s00285-017-1197-3. Epub 2017 Dec 19.
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Rhox13 is required for a quantitatively normal first wave of spermatogenesis in mice.Rhox13基因对于小鼠精子发生的第一波定量正常过程是必需的。
Reproduction. 2016 Nov;152(5):379-88. doi: 10.1530/REP-16-0268. Epub 2016 Aug 2.
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Rhox8 Ablation in the Sertoli Cells Using a Tissue-Specific RNAi Approach Results in Impaired Male Fertility in Mice.使用组织特异性RNAi方法在支持细胞中敲除Rhox8会导致小鼠雄性生育力受损。
Biol Reprod. 2015 Jul;93(1):8. doi: 10.1095/biolreprod.114.124834. Epub 2015 May 13.
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shRNA off-target effects in vivo: impaired endogenous siRNA expression and spermatogenic defects.体内短发夹RNA(shRNA)的脱靶效应:内源性小干扰RNA(siRNA)表达受损及生精缺陷
PLoS One. 2015 Mar 19;10(3):e0118549. doi: 10.1371/journal.pone.0118549. eCollection 2015.
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RHOXF2 gene, a new candidate gene for spermatogenesis failure.RHOXF2 基因,一种新的精子发生失败候选基因。
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The RHOX homeodomain proteins regulate the expression of insulin and other metabolic regulators in the testis.RHOX 同源盒蛋白调节睾丸中胰岛素和其他代谢调节剂的表达。
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