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铜绿假单胞菌4-磷酸赤藓糖脱氢酶的过表达、结晶及初步X射线晶体学分析

Overexpression, crystallization and preliminary X-ray crystallographic analysis of erythronate-4-phosphate dehydrogenase from Pseudomonas aeruginosa.

作者信息

Ha Jun Yong, Lee Ji Hyun, Kim Kyoung Hoon, Kim Do Jin, Lee Hyung Ho, Kim Hye-Kyung, Yoon Hye-Jin, Suh Se Won

机构信息

Department of Chemistry, College of Natural Sciences, Seoul National University, Seoul 151-742, South Korea.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Feb 1;62(Pt 2):139-41. doi: 10.1107/S1744309106000649. Epub 2006 Jan 27.

Abstract

The enzyme erythronate-4-phosphate dehydrogenase catalyses the conversion of erythronate-4-phosphate to 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate. It belongs to the D-isomer-specific 2-hydroxyacid dehydrogenase family. It is essential for de novo biosynthesis of vitamin B6 (pyridoxine). Erythronate-4-phosphate dehydrogenase from Pseudomonas aeruginosa, a homodimeric enzyme consisting of two identical 380-residue subunits, has been overexpressed in Escherichia coli with a C-terminal purification tag and crystallized at 297 K using 0.7 M ammonium dihydrogen phosphate, 0.4 M ammonium tartrate, 0.1 M sodium citrate pH 5.6 and 10 mM cupric chloride. X-ray diffraction data were collected to 2.20 A from a crystal grown in the presence of NADH. The crystals belong to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 84.77, b = 101.28, c = 142.58 A. A dimeric molecule is present in the asymmetric unit, giving a crystal volume per protein weight (VM) of 3.64 A3 Da(-1) and a solvent content of 66%.

摘要

赤藓糖-4-磷酸脱氢酶催化赤藓糖-4-磷酸转化为3-羟基-4-磷酸羟基-α-酮丁酸。它属于D-异构体特异性2-羟基酸脱氢酶家族。它对维生素B6(吡哆醇)的从头生物合成至关重要。来自铜绿假单胞菌的赤藓糖-4-磷酸脱氢酶是一种由两个相同的380个残基亚基组成的同型二聚体酶,已在大肠杆菌中通过C端纯化标签进行过表达,并使用0.7 M磷酸二氢铵、0.4 M酒石酸铵、0.1 M柠檬酸钠pH 5.6和10 mM氯化铜在297 K下结晶。从在NADH存在下生长的晶体收集到2.20 Å的X射线衍射数据。晶体属于正交空间群P2(1)2(1)2(1),晶胞参数a = 84.77,b = 101.28,c = 142.58 Å。一个二聚体分子存在于不对称单元中,蛋白质重量的晶体体积(VM)为3.64 Å3 Da(-1),溶剂含量为66%。

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