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选择性培养和 DNA 杂交法检测水产养殖环境中鳗弧菌的种特异性。

Species-Specific Detection of Vibrio anguillarum in Marine Aquaculture Environments by Selective Culture and DNA Hybridization.

出版信息

Appl Environ Microbiol. 1996 Feb;62(2):443-9. doi: 10.1128/aem.62.2.443-449.1996.

Abstract

Methods for specific detection of Vibrio anguillarum in complex microbial communities within diverse marine aquaculture environments were evaluated. A system for the detection of culturable cells based on the combined use of a selective medium and a nonradioactively labeled oligodeoxynucleotide complementary to 16S rRNA was developed. Four hundred fourteen bacterial cultures were evaluated in order to assess the specificity of the method. When both the selective medium and the specific probe gave positive results, the cultures were always identified as V. anguillarum. The selectivity for colony hybridization was 1 V. anguillarum cell in 10,000 total bacterial cells in environmental samples. The utility of the method was also compared with detection by dot blot hybridization of either raw DNA purified from environmental samples or PCR-amplified DNA of 16S rRNA genes, using universal eubacterial primers. The post-PCR hybridization was more sensitive (8 x 10(sup2) cells) than direct hybridization of the whole purified DNA (10(sup6) cells). However, the selective medium-probe combined method was as sensitive as post-PCR hybridization, albeit more specific.

摘要

评估了在多样化的水产养殖环境中复杂微生物群落中特定检测鳗弧菌的方法。开发了一种基于选择性培养基和与 16S rRNA 互补的非放射性标记寡脱氧核苷酸的可培养细胞检测系统。为了评估该方法的特异性,评估了 414 个细菌培养物。当选择性培养基和特异性探针都给出阳性结果时,培养物总是被鉴定为鳗弧菌。在环境样品中,菌落杂交的选择性为 10000 个总细菌细胞中 1 个鳗弧菌细胞。该方法的实用性也与通过斑点杂交直接杂交从环境样品中提取的原始 DNA 或使用通用细菌引物扩增的 16S rRNA 基因的 DNA 进行检测进行了比较。与直接杂交整个纯化 DNA(10(sup6) 细胞)相比,PCR 后杂交更灵敏(8 x 10(sup2) 细胞)。然而,选择性培养基-探针联合方法与 PCR 后杂交一样灵敏,尽管更具特异性。

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