Shenderovich M D, Nikiforovich G V, Golbraikh A A
Institute of Organic Synthesis, Latvian Academy of Sciences, Riga, Latvia, USSR.
Int J Pept Protein Res. 1991 Apr;37(4):241-51. doi: 10.1111/j.1399-3011.1991.tb00736.x.
Theoretical conformational analysis was carried out for several tetrapeptide analogues of beta-casomorphin and dermorphin containing a Phe residue in position 3. Sets of low-energy backbone structures of the mu-selective peptides [N-Me-Phe3, D-Pro4]-morphiceptin and Tyr-D-Orn-Phe-Asp-NH2 were obtained. These sets of structures were compared for geometrical similarity between themselves and with the low-energy conformations found for the delta-selective peptide Tyr-D-Cys-Phe-D-Pen-OH and nonactive peptide Tyr-Orn-Phe-Asp-NH2. Two pairs of geometrically similar conformations of mu-selective peptides, sharing no similarity with the conformations of peptides showing low affinity to the mu-receptor, were selected as two alternative models of probable mu-receptor-bound backbone conformations. Both models share geometrical similarity with the low-energy structures of the linear mu-selective peptide Tyr-D-Ala-Phe-Phe-NH2. Putative binding conformations of Tyr1 and Phe3 side chains are also discussed.
对β-酪蛋白吗啡样肽和皮啡肽的几种在第3位含有苯丙氨酸残基的四肽类似物进行了理论构象分析。获得了μ-选择性肽[N-Me-Phe3, D-Pro4]-吗啡肽和Tyr-D-Orn-Phe-Asp-NH2的低能主链结构集。将这些结构集相互之间以及与δ-选择性肽Tyr-D-Cys-Phe-D-Pen-OH和无活性肽Tyr-Orn-Phe-Asp-NH2的低能构象进行几何相似性比较。选择了两对几何相似的μ-选择性肽构象,它们与对μ-受体亲和力低的肽的构象没有相似性,作为可能的μ-受体结合主链构象模型的两种替代模型。这两种模型都与线性μ-选择性肽Tyr-D-Ala-Phe-Phe-NH2的低能结构具有几何相似性。还讨论了Tyr1和Phe3侧链的推定结合构象。