Rae A David, Willis Anthony C, Loong David T J, Banwell Martin G
Research School of Chemistry, The Australian National University, Canberra, ACT 2601, Australia.
Acta Crystallogr B. 2006 Apr;62(Pt 2):262-7. doi: 10.1107/S0108768105041650. Epub 2006 Mar 15.
(Z,2R,3R,4aR,7R,12aS)-2,3,7,8,12,12a-Hexahydro-2,3-dimethoxy-2,3,7-trimethyl-4aH-[1,4]dioxino[2,3-c]oxecin-5(11H)-one (C16H26O6) crystallizes in the space group P3(1) and approximates the conditions necessary for diffraction symmetry enhancement without twinning for the h - k not = 3N reflections. The structure may be described as an occupancy modulation of a 1:1 disordered P3(1)21 parent structure with Z = 3 that would only contribute to the h - k = 3N reflections. The crystal studied was a 0.717 (2):0.283 twin, but also had a stacking fault that on average caused the (1 - p(j)):p(j) population ratio for the alternative orientations of ordered columns along the three non-equivalent screw axes (j = 1, 2 or 3) of P3(1) to be describable by p1 = 0.068 (3), p2 = p3 = 0.960 (3). The effect of these stacking faults could be simulated using global parameters that modify an ordered prototype structure. The structure reveals that the ten-membered lactone ring incorporates a Z-configured double bond and that the methoxy-substituted stereogenic centers created during a trans-diol protection step each possess the R-configuration.
(Z,2R,3R,4aR,7R,12aS)-2,3,7,8,12,12a-六氢-2,3-二甲氧基-2,3,7-三甲基-4aH-[1,4]二氧杂环辛并[2,3-c]氧杂环十三烷-5(11H)-酮(C₁₆H₂₆O₆)以P3(1)空间群结晶,对于h - k ≠ 3N的反射,其近似于无孪晶情况下增强衍射对称性所需的条件。该结构可描述为一种1:1无序P3(1)2₁母体结构(Z = 3)的占有率调制,这种母体结构仅对h - k = 3N的反射有贡献。所研究的晶体是一个0.717(2):0.283的孪晶,但也存在堆垛层错,平均而言,对于P3(1)的三个非等效螺旋轴(j = 1、2或3)上有序柱的交替取向,其(1 - p(j)):p(j)的数量比可用p1 = 0.068(3)、p2 = p3 = 0.960(3)来描述。这些堆垛层错的影响可以使用修改有序原型结构的全局参数来模拟。该结构表明,十元内酯环包含一个Z构型的双键,并且在反式二醇保护步骤中产生的甲氧基取代的手性中心均具有R构型。