焦脱镁叶绿酸a·2H₂O的晶体结构和分子结构及其与叶绿素a的结构和聚集的关系
The Crystal and Molecular Structure of Ethyl Chlorophyllide a.2H(2)O and Its Relationship to the Structure and Aggregation of Chlorophyll a.
作者信息
Strouse C E
机构信息
Department of Chemistry, University of California, Los Angeles, Los Angeles, Calif. 90024.
出版信息
Proc Natl Acad Sci U S A. 1974 Feb;71(2):325-8. doi: 10.1073/pnas.71.2.325.
Abstract
Determination of the crystal structure of ethyl chlorophyllide a.2H(2)O by single crystal x-ray diffraction techniques has provided the first detailed molecular structural data available for a magnesium-containing derivative of chlorophyll. At the same time the aggregation observed in this structure serves as the basis for a model of chlorophyll aggregation in vitro and in vivo. The magnesium atom in ethyl chlorophyllide is displaced 0.4 A from the plane of the chlorin ring in the same direction as the methyl ester substituent. A water molecule occupies the fifth coordination site. A second water molecule is hydrogen bonded to the coordinated water molecule and also to the carbonyl oxygen atom of the methyl ester. Hydrogen bonds between the water molecules and carbonyl oxygen atoms link the chlorophyllide molecules into a two-dimensional aggregate of crosslinked one-dimensional polymers. The relationship of this aggregate to aggregates of chlorophyll both in vitro and in vivo is discussed, as is the efficiency of exciton transport within the polymer.
摘要
通过单晶X射线衍射技术测定叶绿素酸乙酯a·2H₂O的晶体结构，首次提供了有关含镁叶绿素衍生物的详细分子结构数据。与此同时，在此结构中观察到的聚集作用为体外和体内叶绿素聚集模型奠定了基础。叶绿素酸乙酯中的镁原子在与甲酯取代基相同的方向上，偏离二氢卟吩环平面0.4埃。一个水分子占据第五个配位点。第二个水分子通过氢键与配位水分子相连，同时也与甲酯的羰基氧原子相连。水分子与羰基氧原子之间的氢键将叶绿素酸分子连接成交联的一维聚合物的二维聚集体。本文讨论了这种聚集体与体外和体内叶绿素聚集体的关系，以及聚合物内激子传输的效率。
相似文献
1
The Crystal and Molecular Structure of Ethyl Chlorophyllide a.2H(2)O and Its Relationship to the Structure and Aggregation of Chlorophyll a.焦脱镁叶绿酸a·2H₂O的晶体结构和分子结构及其与叶绿素a的结构和聚集的关系
Proc Natl Acad Sci U S A. 1974 Feb;71(2):325-8. doi: 10.1073/pnas.71.2.325.
2
Chiral one- and two-dimensional silver(I)-biotin coordination polymers.手性一维和二维银（I）-生物素配位聚合物。
Acta Crystallogr C. 2013 Feb;69(Pt 2):127-37. doi: 10.1107/S0108270113000322. Epub 2013 Jan 22.
3
In situ single-crystal to single-crystal (SCSC) transformation of the one-dimensional polymer catena-poly[[diaqua(sulfato)copper(II)]-μ₂-glycine] into the two-dimensional polymer poly[μ₂-glycine-μ₄-sulfato-copper(II)].一维聚合物链状聚[[二水合（硫酸根）铜（II）]-μ₂-甘氨酸]原位单晶到单晶（SCSC）转变为二维聚合物聚[μ₂-甘氨酸-μ₄-硫酸根-铜（II）] 。
Acta Crystallogr C Struct Chem. 2014 Nov;70(Pt 11):1057-63. doi: 10.1107/S2053229614021123. Epub 2014 Oct 15.
4
Hydrogen-bonded polyrotaxane-like structure containing cyclic (H2O)4 in [Zn(OAc)2(mu-bpe)]2.H2O: X-ray and neutron diffraction studies.[Zn(OAc)₂(μ-bpe)]₂·H₂O中含环状(H₂O)₄的氢键类聚轮烷结构：X射线和中子衍射研究
Chemistry. 2004 Nov 5;10(22):5853-9. doi: 10.1002/chem.200400551.
5
The antitumour drug 7-ethyl-10-hydroxycamptothecin monohydrate and its solid-state hydrolysis mechanism on heating.抗肿瘤药物7-乙基-10-羟基喜树碱一水合物及其加热时的固态水解机理。
Acta Crystallogr C Struct Chem. 2016 Oct 1;72(Pt 10):743-747. doi: 10.1107/S2053229616014492. Epub 2016 Sep 23.
6
Enzymes of the last steps of chlorophyll biosynthesis: modification of the substrate structure helps to understand the topology of the active centers.叶绿素生物合成最后几步的酶：底物结构的修饰有助于理解活性中心的拓扑结构。
Biochemistry. 2005 Aug 16;44(32):10864-72. doi: 10.1021/bi0504198.
7
A 3-D structural model of solid self-assembled chlorophyll a/H(2)O from multispin labeling and MAS NMR 2-D dipolar correlation spectroscopy in high magnetic field.通过多自旋标记和高磁场下的MAS NMR二维偶极相关光谱法得到的固体自组装叶绿素a/H₂O的三维结构模型。
J Magn Reson. 2002 Mar;155(1):1-14. doi: 10.1006/jmre.2002.2502.
8
Semiempirical PM5 molecular orbital study on chlorophylls and bacteriochlorophylls: comparison of semiempirical, ab initio, and density functional results.叶绿素和细菌叶绿素的半经验PM5分子轨道研究：半经验、从头算和密度泛函结果的比较
J Comput Chem. 2004 Jan 15;25(1):123-38. doi: 10.1002/jcc.10344.
9
Excitation transport and trapping in a synthetic chlorophyllide substituted hemoglobin: orientation of the chlorophyll S1 transition dipole.合成叶绿素取代血红蛋白中的激发传输与捕获：叶绿素S1跃迁偶极子的取向
Biochemistry. 1984 Mar 27;23(7):1564-71. doi: 10.1021/bi00302a034.
10
Born-Oppenheimer molecular dynamics and electronic properties of chlorophyll-c(2) in liquid methanol.Born-Oppenheimer 分子动力学和叶绿素-c(2)在液态甲醇中的电子性质。
J Chem Phys. 2013 Jun 14;138(22):225102. doi: 10.1063/1.4808177.
引用本文的文献
1
On "P750s" in cyanobacteria: A historical perspective.关于蓝藻中的“P750s”：历史视角
Photosynthetica. 2024 Dec 18;62(4):406-408. doi: 10.32615/ps.2024.042. eCollection 2024.
2
The terminal enzymes of (bacterio)chlorophyll biosynthesis.（细菌）叶绿素生物合成的末端酶。
R Soc Open Sci. 2022 May 4;9(5):211903. doi: 10.1098/rsos.211903. eCollection 2022 May.
3
Short-Term Magnesium Deficiency Triggers Nutrient Retranslocation in .短期镁缺乏引发营养物质再转运 。 （原文句子不完整，推测大概意思翻译如上）
Front Plant Sci. 2020 Jun 4;11:563. doi: 10.3389/fpls.2020.00563. eCollection 2020.
4
Green thoughts in a green shade.绿荫里的环保思绪。
Photosynth Res. 1990 Dec;26(3):143-60. doi: 10.1007/BF00033128.
5
On the structure of bacteriochlorophyll molecular aggregates in the chlorosomes of green bacteria. A molecular modelling study.关于绿色细菌的菌绿体中细菌叶绿素分子聚集体的结构。分子建模研究。
Photosynth Res. 1994 Jul;41(1):225-33. doi: 10.1007/BF02184163.
6
Energy-transducing membrane : II. Roles of liquid crystal in the photoresponse of a chlorophyll liquid crystal membrane.能量转换膜：二、液晶在叶绿素液晶膜光响应中的作用。
Appl Biochem Biotechnol. 1981 Jun;6(2):143-52. doi: 10.1007/BF02779246.
7
The triplet state in bacterial photosynthesis: Possible mechanisms of the primary photo-act.细菌光合作用中的三重态：初级光反应的可能机制。
Proc Natl Acad Sci U S A. 1975 Sep;72(9):3270-4. doi: 10.1073/pnas.72.9.3270.
8
Donor properties of the three carbonyl groups of chlorophyll a: ab initio calculations and 13C magnetic resonance studies.叶绿素a三个羰基的给体性质：从头算计算和13C磁共振研究。
Proc Natl Acad Sci U S A. 1975 Aug;72(8):2873-6. doi: 10.1073/pnas.72.8.2873.
9
Nitrogen electron nuclear double resonance and proton triple resonance experiments on the bacteriochlorophyll cation in solution.溶液中细菌叶绿素阳离子的氮电子核双共振和质子三重共振实验。
Proc Natl Acad Sci U S A. 1978 May;75(5):2296-300. doi: 10.1073/pnas.75.5.2296.
本文引用的文献
1
Circular dichroism and fluorescence changes accompanying the protochylorophyllide to chlorophyllide transformation in greening leaves and holochrome preparations.绿化叶片和全色素制剂中原叶绿素酸酯向叶绿素酸酯转化过程中伴随的圆二色性和荧光变化。
Biochim Biophys Acta. 1972 May 25;267(2):320-40. doi: 10.1016/0005-2728(72)90120-x.
2
Exciton interaction in a bacteriochlorophyll--protein from Chloropseudomonas ethylica. Absorption and circular dichroism at 77 degrees K.来自嗜乙基绿假单胞菌的细菌叶绿素-蛋白质中的激子相互作用。77K时的吸收和圆二色性。
Biochemistry. 1972 May 9;11(10):1880-5. doi: 10.1021/bi00760a024.
3
Electron spin resonance of chlorophyll and the origin of signal I in photosynthesis.叶绿素的电子自旋共振与光合作用中信号I的起源
Proc Natl Acad Sci U S A. 1971 Mar;68(3):625-8. doi: 10.1073/pnas.68.3.625.
4
The distribution and action in photosynthesis of several forms of chlorophyll.几种叶绿素形式在光合作用中的分布与作用。
Proc Natl Acad Sci U S A. 1971 Nov;68(11):2893-7. doi: 10.1073/pnas.68.11.2893.
5
Exciton interaction in the photosystem I reaction center from spinach chloroplasts. Absorption and circular dichroism difference spectra.菠菜叶绿体光系统I反应中心中的激子相互作用。吸收光谱和圆二色性差光谱。
Biochemistry. 1972 Nov 21;11(24):4591-5. doi: 10.1021/bi00774a027.
6
Comparative study of the circular dichroism spectra of reaction centers from several photosynthetic bacteria.几种光合细菌反应中心圆二色光谱的比较研究。
Biochemistry. 1973 Jan 30;12(3):535-9. doi: 10.1021/bi00727a028.
7
Characterization of primary reactants in bacterial photosynthesis. I. Comparison of the light-induced EPR signal (g=2.0026) with that of a bacteriochlorophyll radical.细菌光合作用中初级反应物的表征。I. 光诱导电子顺磁共振信号（g = 2.0026）与细菌叶绿素自由基信号的比较。
Biochim Biophys Acta. 1972 May 25;267(2):363-74. doi: 10.1016/0005-2728(72)90123-5.
Zotero 插件