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利用随机扩增多态性DNA标记对木槿属植物(锦葵科)进行鉴定及遗传变异分析

Identification and genetic variation among Hibiscus species (Malvaceae) using RAPD markers.

作者信息

Barik Suvakanta, Senapati Sunil Kumar, Aparajita Subhashree, Mohapatra Anuradha, Rout Gyana Ranjan

机构信息

Plant Biotechnology Division, Regional Plant Resource Centre, Bhubaneswar-751015, Orissa, India.

出版信息

Z Naturforsch C J Biosci. 2006 Jan-Feb;61(1-2):123-8. doi: 10.1515/znc-2006-1-222.

Abstract

Germplasm identification and characterization is an important link between the conservation and utilization of plant genetic resources. Traditionally, species or cultivars identification has relied on morphological characters like growth habit or floral morphology like flower colour and other characteristics of the plant. Studies were undertaken for identification and determination of genetic variation within the two species of Hibiscus and 16 varieties of Hibiscus rosa-sinensis L. through random amplified polymorphic (RAPD) markers. Primer screening was made by using the DNA of variety "Prolific". Genetic analysis was made by using ten selected decamer primers. A total of 79 distinct DNA fragments ranging from 0.3 to 2.5 kb were amplified by using ten selected random decamer primers. The genetic similarity was evaluated on the basis of presence or absence of bands. The cluster analysis indicated that the 16 varieties and two species formed one cluster. The first major cluster consisted of three varieties and a second major cluster consisted of two species and 13 varieties. The genetic distance was very close within the varieties and also among the species. Thus, these RAPD markers have the potential for identification of species/varieties and characterization of genetic variation within the varieties. This is also helpful in Hibiscus breeding programs and provides a major input into conservation biology.

摘要

种质鉴定与特征分析是植物遗传资源保护与利用之间的重要环节。传统上,物种或品种的鉴定依赖于形态特征,如生长习性或花的形态,如花色以及植物的其他特征。通过随机扩增多态性(RAPD)标记对两种木槿属植物和16个扶桑品种进行了遗传变异的鉴定与测定研究。以“多产”品种的DNA进行引物筛选。使用十个选定的十聚体引物进行遗传分析。十个选定的随机十聚体引物共扩增出79个不同的DNA片段,大小在0.3至2.5 kb之间。根据条带的有无评估遗传相似性。聚类分析表明,16个品种和两个物种形成一个聚类。第一个主要聚类由三个品种组成,第二个主要聚类由两个物种和13个品种组成。品种内以及物种间的遗传距离非常接近。因此,这些RAPD标记具有鉴定物种/品种以及表征品种内遗传变异的潜力。这对扶桑育种计划也有帮助,并为保护生物学提供了重要依据。

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