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哺乳动物半胱氨酸双加氧酶的晶体结构。一种用于半胱氨酸硫醇氧化的新型单核铁中心。

Crystal structure of mammalian cysteine dioxygenase. A novel mononuclear iron center for cysteine thiol oxidation.

作者信息

Simmons Chad R, Liu Qun, Huang Qingqiu, Hao Quan, Begley Tadhg P, Karplus P Andrew, Stipanuk Martha H

机构信息

Division of Nutritional Sciences, Cornell University, Ithaca, NY 14853-8001, USA.

出版信息

J Biol Chem. 2006 Jul 7;281(27):18723-33. doi: 10.1074/jbc.M601555200. Epub 2006 Apr 11.

Abstract

Cysteine dioxygenase is a mononuclear iron-dependent enzyme responsible for the oxidation of cysteine with molecular oxygen to form cysteine sulfinate. This reaction commits cysteine to either catabolism to sulfate and pyruvate or the taurine biosynthetic pathway. Cysteine dioxygenase is a member of the cupin superfamily of proteins. The crystal structure of recombinant rat cysteine dioxygenase has been determined to 1.5-A resolution, and these results confirm the canonical cupin beta-sandwich fold and the rare cysteinyltyrosine intramolecular cross-link (between Cys(93) and Tyr(157)) seen in the recently reported murine cysteine dioxygenase structure. In contrast to the catalytically inactive mononuclear Ni(II) metallocenter present in the murine structure, crystallization of a catalytically competent preparation of rat cysteine dioxygenase revealed a novel tetrahedrally coordinated mononuclear iron center involving three histidines (His(86), His(88), and His(140)) and a water molecule. Attempts to acquire a structure with bound ligand using either cocrystallization or soaking crystals with cysteine revealed the formation of a mixed disulfide involving Cys(164) near the active site, which may explain previously observed substrate inhibition. This work provides a framework for understanding the molecular mechanisms involved in thiol dioxygenation and sets the stage for exploration of the chemistry of both the novel mononuclear iron center and the catalytic role of the cysteinyl-tyrosine linkage.

摘要

半胱氨酸双加氧酶是一种单核铁依赖性酶,负责将半胱氨酸与分子氧氧化形成半胱氨酸亚磺酸盐。该反应使半胱氨酸进入分解代谢生成硫酸盐和丙酮酸的途径或牛磺酸生物合成途径。半胱氨酸双加氧酶是cupin超家族蛋白质的成员。重组大鼠半胱氨酸双加氧酶的晶体结构已确定至1.5埃分辨率,这些结果证实了典型的cupinβ-三明治折叠以及在最近报道的小鼠半胱氨酸双加氧酶结构中看到的罕见的半胱氨酰酪氨酸分子内交联(在Cys(93)和Tyr(157)之间)。与小鼠结构中存在的无催化活性的单核Ni(II)金属中心不同,具有催化活性的大鼠半胱氨酸双加氧酶制剂的结晶揭示了一个新的四面体配位单核铁中心,涉及三个组氨酸(His(86)、His(88)和His(140))和一个水分子。尝试通过共结晶或用半胱氨酸浸泡晶体来获得带有结合配体的结构,结果显示在活性位点附近形成了涉及Cys(164)的混合二硫键,这可能解释了先前观察到的底物抑制现象。这项工作为理解硫醇双加氧所涉及的分子机制提供了一个框架,并为探索新型单核铁中心的化学性质和半胱氨酰 - 酪氨酸连接的催化作用奠定了基础。

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