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统计模式匹配有助于设计炭疽毒素和霍乱毒素的多价抑制剂。

Statistical pattern matching facilitates the design of polyvalent inhibitors of anthrax and cholera toxins.

作者信息

Rai Prakash, Padala Chakradhar, Poon Vincent, Saraph Arundhati, Basha Saleem, Kate Sandesh, Tao Kevin, Mogridge Jeremy, Kane Ravi S

机构信息

The Howard P. Isermann Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Ricketts 131, 110 8th Street, Troy, New York 12180, USA.

出版信息

Nat Biotechnol. 2006 May;24(5):582-6. doi: 10.1038/nbt1204. Epub 2006 Apr 23.

Abstract

Numerous biological processes involve the recognition of a specific pattern of binding sites on a target protein or surface. Although ligands displayed by disordered scaffolds form stochastic rather than specific patterns, theoretical models predict that recognition will occur between patterns that are characterized by similar or "matched" statistics. Endowing synthetic biomimetic structures with statistical pattern matching capabilities may improve the specificity of sensors and resolution of separation processes. We demonstrate that statistical pattern matching enhances the potency of polyvalent therapeutics. We functionalized liposomes with an inhibitory peptide at different densities and observed a transition in potency at an interpeptide separation that matches the distance between ligand-binding sites on the heptameric component of anthrax toxin. Pattern-matched polyvalent liposomes inhibited anthrax toxin in vitro at concentrations four orders of magnitude lower than the corresponding monovalent peptide, and neutralized this toxin in vivo. Statistical pattern matching also enhanced the potency of polyvalent inhibitors of cholera toxin. This facile strategy should be broadly applicable to the detection and neutralization of toxins and pathogens.

摘要

许多生物过程都涉及对靶蛋白或表面上特定结合位点模式的识别。尽管由无序支架展示的配体形成的是随机而非特定模式,但理论模型预测,识别将发生在具有相似或“匹配”统计特征的模式之间。赋予合成仿生结构统计模式匹配能力可能会提高传感器的特异性和分离过程的分辨率。我们证明,统计模式匹配可增强多价治疗剂的效力。我们用抑制性肽以不同密度对脂质体进行功能化,并在肽间间隔处观察到效力的转变,该间隔与炭疽毒素七聚体成分上配体结合位点之间的距离相匹配。模式匹配的多价脂质体在体外抑制炭疽毒素的浓度比相应的单价肽低四个数量级,并在体内中和了这种毒素。统计模式匹配还增强了霍乱毒素多价抑制剂的效力。这种简便的策略应广泛适用于毒素和病原体的检测与中和。

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