Peacock R Sean, Andrushchenko Valery V, Demcoe A Ross, Gehmlich Matt, Lu Lily Sia, Herrero Alicia Garcia, Vogel Hans J
Structural Biology Research Group, Department of Biological Sciences, University of Calgary, Calgary, Alberta, T2N 1N4, Canada.
Biometals. 2006 Apr;19(2):127-42. doi: 10.1007/s10534-005-5420-0.
The mechanism of TonB dependent siderophore uptake through outer membrane transporters in Gram-negative bacteria is poorly understood. In an effort to expand our knowledge of the interaction between TonB and the outer membrane transporters, we have cloned and expressed the FepA cork domain (11-154) from Salmonella typhimurium and characterized its interaction with the periplasmic C-terminal domain of TonB (103-239) by isotope assisted FTIR and NMR spectroscopy. For comparison we also performed similar experiments using the FecA N-terminal domain (1-96) from Escherichia coli which includes the conserved TonB box. The FepA cork domain was completely unfolded in solution, as observed for the E. coli cork domain previously [Usher et al. (2001) Proc Natl Acad Sci USA 98, 10676-10681]. The FepA cork domain was found to bind to TonB, eliciting essentially the same chemical shift changes in TonB C-terminal domain as was observed in the presence of TonB box peptides. The FecA construct did not cause this same structural change in TonB. The binding of the FepA cork domain to TonB-CTD was found to decrease the amount of ordered secondary structure in TonB-CTD. It is likely that the FecA N-terminal domain interferes with TonB-CTD binding to the TonB box. Binding of the FepA cork domain induces a loss of secondary structure in TonB, possibly exposing TonB surface area for additional intermolecular interactions such as potential homodimerization or additional interactions with the barrel of the outer membrane transporter.
革兰氏阴性菌中通过外膜转运蛋白摄取TonB依赖性铁载体的机制尚不清楚。为了扩展我们对TonB与外膜转运蛋白之间相互作用的认识,我们克隆并表达了鼠伤寒沙门氏菌的FepA塞子结构域(11 - 154),并通过同位素辅助傅里叶变换红外光谱和核磁共振光谱对其与TonB周质C末端结构域(103 - 239)的相互作用进行了表征。为了进行比较,我们还使用了大肠杆菌的FecA N末端结构域(1 - 96)进行了类似实验,该结构域包含保守的TonB框。正如之前对大肠杆菌塞子结构域所观察到的那样[厄舍等人(2001年)《美国国家科学院院刊》98卷,10676 - 10681页],FepA塞子结构域在溶液中完全展开。发现FepA塞子结构域与TonB结合,在TonB C末端结构域中引发的化学位移变化与在存在TonB框肽时观察到的基本相同。FecA构建体在TonB中并未引起相同的结构变化。发现FepA塞子结构域与TonB - CTD的结合会减少TonB - CTD中有序二级结构的量。FecA N末端结构域可能会干扰TonB - CTD与TonB框的结合。FepA塞子结构域的结合会导致TonB二级结构丧失,可能会暴露TonB的表面积以进行额外的分子间相互作用,例如潜在的同二聚化或与外膜转运蛋白桶状结构的额外相互作用。