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两个与细菌插入序列IS629转座有关的移码产物。

Two frameshift products involved in the transposition of bacterial insertion sequence IS629.

作者信息

Chen Chang-Chieh, Hu Shiau-Ting

机构信息

Institute of Microbiology and Immunology, School of Life Sciences, National Yang-Ming University, No. 155, Li-Nong St., Sec. 2, Shih-Pai, Taipei 112, Taiwan.

Institute of Microbiology and Immunology, School of Life Sciences, National Yang-Ming University, No. 155, Li-Nong St., Sec. 2, Shih-Pai, Taipei 112, Taiwan; Department of Microbiology, School of Medicine, National Yang-Ming University, No. 155, Li-Nong St., Sec. 2, Shih-Pai, Taipei 112, Taiwan.

出版信息

J Biol Chem. 2006 Aug 4;281(31):21617-21628. doi: 10.1074/jbc.M602437200. Epub 2006 May 25.

Abstract

IS629 is 1,310 bp in length with a pair of 25-bp imperfect inverted repeats at its termini. Two partially overlapping open reading frames, orfA and orfB, are present in IS629, and two putative translational frameshift signals, TTTTG (T4G) and AAAAT (A4T), are located near the 3'-end of orfA. With the lacZ gene as the reporter, both T4G and A4T motifs are determined to be a -1 frameshift signal. Two peptides representing the two transframe products designated OrfAB' and OrfAB, are identified by a liquid chromatography-tandem mass spectrometric approach. Results of transposition assays show that OrfAB' is the transposase and that OrfAB aids in the transposition of IS629. Pulse-chase experiments and Escherichia coli two-hybrid assays demonstrate that OrfAB binds to and stabilizes OrfAB', thus increasing the transposition activity of IS629. This is the first transposable element in the IS3 family shown to have two functional frameshifted products involved in transposition and to use a transframe product to regulate transposition.

摘要

IS629长度为1310碱基对,其末端有一对25碱基对的不完全反向重复序列。IS629中存在两个部分重叠的开放阅读框,即orfA和orfB,并且两个推定的翻译移码信号TTTTG(T4G)和AAAAT(A4T)位于orfA的3'端附近。以lacZ基因作为报告基因,确定T4G和A4T基序均为-1移码信号。通过液相色谱-串联质谱法鉴定出代表两种移码产物(分别命名为OrfAB'和OrfAB)的两种肽段。转座试验结果表明,OrfAB'是转座酶,而OrfAB有助于IS629的转座。脉冲追踪实验和大肠杆菌双杂交试验表明,OrfAB与OrfAB'结合并使其稳定,从而提高IS629的转座活性。这是IS3家族中首个被证明有两种参与转座的功能性移码产物且利用一种移码产物来调控转座的转座元件。

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