• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用质谱法直接筛选动态组合库。

Direct screening of a dynamic combinatorial library using mass spectrometry.

作者信息

Poulsen Sally-Ann

机构信息

Eskitis Institute for Cell and Molecular Therapies, Griffith University, Nathan, Brisbane, 4111, Queensland, Australia.

出版信息

J Am Soc Mass Spectrom. 2006 Aug;17(8):1074-1080. doi: 10.1016/j.jasms.2006.03.017. Epub 2006 Jun 2.

DOI:10.1016/j.jasms.2006.03.017
PMID:16735129
Abstract

A dynamic combinatorial library (DCL) screening approach is described that permits direct identification of the effective (from ineffective) combination of building blocks in the equilibrating DCL. The approach uses Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) together with sustained off-resonance irradiation collision activated dissociation (SORI-CAD) to detect noncovalent protein-DCL ligand complexes under native conditions. It was shown that in a single, rapid experiment one could concurrently identify all the ligands of interest from the DCL against a background of inactive DCL ligands while still in the presence of the target protein. This result has demonstrated that mass spectrometry may provide a fast preliminary screening approach to identify DCL candidates for later verification with more traditional but time-consuming analysis. The MS/MS enables DCL mixtures to be effectively deconvoluted without the need for either chromatography, synthesis of DCL sub-libraries, conversion of the DCL to a static library, or disruption of the protein-ligand complexes before analysis--all typically necessary for the current screening method for DCLs.

摘要

本文描述了一种动态组合库(DCL)筛选方法,该方法能够直接在平衡的DCL中识别有效(与无效相对)的构建块组合。该方法使用傅里叶变换离子回旋共振质谱(FTICR MS)和持续非共振辐照碰撞激活解离(SORI-CAD)来在天然条件下检测非共价蛋白质-DCL配体复合物。结果表明,在单个快速实验中,人们可以在仍存在靶蛋白的情况下,在无活性DCL配体的背景下同时从DCL中识别出所有感兴趣的配体。这一结果表明,质谱法可为识别DCL候选物提供一种快速的初步筛选方法,以便随后用更传统但耗时的分析方法进行验证。串联质谱(MS/MS)能够有效地对DCL混合物进行解卷积,而无需进行色谱分析、合成DCL子库、将DCL转化为静态库或在分析前破坏蛋白质-配体复合物,而这些通常是当前DCL筛选方法所必需的。

相似文献

1
Direct screening of a dynamic combinatorial library using mass spectrometry.使用质谱法直接筛选动态组合库。
J Am Soc Mass Spectrom. 2006 Aug;17(8):1074-1080. doi: 10.1016/j.jasms.2006.03.017. Epub 2006 Jun 2.
2
Electrospray ionisation Fourier-transform ion cyclotron resonance mass spectrometry of dynamic combinatorial libraries.动态组合库的电喷雾电离傅里叶变换离子回旋共振质谱分析
Rapid Commun Mass Spectrom. 2000;14(1):44-8. doi: 10.1002/(SICI)1097-0231(20000115)14:1<44::AID-RCM832>3.0.CO;2-6.
3
FTICR-mass spectrometry for high-resolution analysis in combinatorial chemistry.用于组合化学中高分辨率分析的傅里叶变换离子回旋共振质谱法。
Biotechnol Bioeng. 2000;71(2):149-61.
4
Screening a natural product-based combinatorial library using FTICR mass spectrometry.使用傅里叶变换离子回旋共振质谱法筛选基于天然产物的组合文库。
Bioorg Med Chem. 2006 Jan 15;14(2):510-5. doi: 10.1016/j.bmc.2005.08.030. Epub 2005 Sep 29.
5
In-trap cleanup of proteins from electrospray ionization using soft sustained off-resonance irradiation with fourier transform ion cyclotron resonance mass spectrometry.利用傅里叶变换离子回旋共振质谱的软持续非共振辐照对电喷雾电离中的蛋白质进行阱内清理。
Anal Chem. 1998 Jan 15;70(2):405-8. doi: 10.1021/ac970828c.
6
Rapid characterization of combinatorial libraries using electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry.使用电喷雾电离傅里叶变换离子回旋共振质谱法对组合文库进行快速表征。
Comb Chem High Throughput Screen. 1998 Apr;1(1):23-33.
7
Sialylation analysis of O-glycosylated sialylated peptides from urine of patients suffering from Schindler's disease by Fourier transform ion cyclotron resonance mass spectrometry and sustained off-resonance irradiation collision-induced dissociation.通过傅里叶变换离子回旋共振质谱法和持续非共振辐照碰撞诱导解离对患有辛德勒病患者尿液中的O-糖基化唾液酸化肽进行唾液酸化分析。
Rapid Commun Mass Spectrom. 2003;17(24):2822-32. doi: 10.1002/rcm.1273.
8
FTICR mass spectrometry for qualitative and quantitative bioanalyses.用于定性和定量生物分析的傅里叶变换离子回旋共振质谱法。
Curr Opin Biotechnol. 2004 Feb;15(1):3-11. doi: 10.1016/j.copbio.2004.01.002.
9
Fourier transform-ion cyclotron resonance mass spectrometric resolution, identification, and screening of non-covalent complexes of Hck Src homology 2 domain receptor and ligands from a 324-member peptide combinatorial library.傅里叶变换离子回旋共振质谱法对来自324个成员的肽组合文库的Hck Src同源2结构域受体与配体的非共价复合物进行分辨率测定、鉴定和筛选。
J Am Soc Mass Spectrom. 2002 Oct;13(10):1162-9. doi: 10.1016/S1044-0305(02)00439-7.
10
Radical-directed dissociation of peptides and proteins by infrared multiphoton dissociation and sustained off-resonance irradiation collision-induced dissociation with Fourier transform ion cyclotron resonance mass spectrometry.通过红外多光子解离以及傅里叶变换离子回旋共振质谱的持续非共振辐照碰撞诱导解离实现肽和蛋白质的自由基导向解离
Rapid Commun Mass Spectrom. 2014 Dec 30;28(24):2729-34. doi: 10.1002/rcm.7068.

引用本文的文献

1
Fragment-based drug discovery campaigns guided by native mass spectrometry.基于天然质谱的片段药物发现研究
RSC Med Chem. 2024 May 22;15(7):2270-2285. doi: 10.1039/d4md00273c. eCollection 2024 Jul 17.
2
Fragment-Based Drug Discovery against Mycobacteria: The Success and Challenges.基于片段的抗分枝杆菌药物发现:成功与挑战。
Int J Mol Sci. 2022 Sep 14;23(18):10669. doi: 10.3390/ijms231810669.
3
Native Mass Spectrometry in Fragment-Based Drug Discovery.基于片段的药物发现中的质谱分析技术

本文引用的文献

1
In vitro combinatorial chemistry to create drug candidates.用于创制候选药物的体外组合化学。
Drug Discov Today Technol. 2004 Dec;1(3):261-7. doi: 10.1016/j.ddtec.2004.11.019.
2
Fragment-based drug discovery of carbonic anhydrase II inhibitors by dynamic combinatorial chemistry utilizing alkene cross metathesis.利用烯烃复分解反应的动态组合化学进行碳酸酐酶II抑制剂的基于片段的药物发现。
Bioorg Med Chem. 2006 May 15;14(10):3275-84. doi: 10.1016/j.bmc.2005.12.054. Epub 2006 Jan 20.
3
Uracil-directed ligand tethering: an efficient strategy for uracil DNA glycosylase (UNG) inhibitor development.
Molecules. 2016 Jul 28;21(8):984. doi: 10.3390/molecules21080984.
4
Protein-Directed Dynamic Combinatorial Chemistry: A Guide to Protein Ligand and Inhibitor Discovery.蛋白质导向的动态组合化学:蛋白质配体与抑制剂发现指南
Molecules. 2016 Jul 16;21(7):910. doi: 10.3390/molecules21070910.
5
Identification of lipid-phosphatidylserine (PS) as the target of unbiasedly selected cancer specific peptide-peptoid hybrid PPS1.鉴定脂质磷脂酰丝氨酸(PS)为无偏向性选择的癌症特异性肽-类肽杂交体PPS1的靶点。
Oncotarget. 2016 May 24;7(21):30678-90. doi: 10.18632/oncotarget.8929.
6
The use of electrospray mass spectrometry to determine speciation in a dynamic combinatorial library for anion recognition.利用电喷雾质谱法测定阴离子识别动态组合库中的形态。
Chemistry. 2012 Oct 22;18(43):13733-42. doi: 10.1002/chem.201201302. Epub 2012 Sep 20.
7
The hydrazide/hydrazone click reaction as a biomolecule labeling strategy for M(CO)3 (M = Re, (99m)Tc) radiopharmaceuticals.酰腙/腙点击反应作为一种生物分子标记策略用于 M(CO)3(M = Re,(99m)Tc)放射性药物。
Chem Commun (Camb). 2011 Dec 28;47(48):12846-8. doi: 10.1039/c1cc15451f. Epub 2011 Nov 1.
8
Nucleophilic catalysis of acylhydrazone equilibration for protein-directed dynamic covalent chemistry.酰腙平衡的亲核催化用于蛋白质导向的动态共价化学。
Nat Chem. 2010 Jun;2(6):490-7. doi: 10.1038/nchem.658. Epub 2010 May 16.
9
Selective inhibitors of the JMJD2 histone demethylases: combined nondenaturing mass spectrometric screening and crystallographic approaches.选择性 JMJD2 组蛋白去甲基酶抑制剂:联合非变性质谱筛选和晶体学方法。
J Med Chem. 2010 Feb 25;53(4):1810-8. doi: 10.1021/jm901680b.
10
Collision induced unfolding of protein ions in the gas phase studied by ion mobility-mass spectrometry: the effect of ligand binding on conformational stability.离子迁移率-质谱法研究气相中蛋白质离子的碰撞诱导去折叠:配体结合对构象稳定性的影响
J Am Soc Mass Spectrom. 2009 Oct;20(10):1851-8. doi: 10.1016/j.jasms.2009.06.010. Epub 2009 Jul 1.
尿嘧啶导向的配体连接:一种开发尿嘧啶DNA糖基化酶(UNG)抑制剂的有效策略。
J Am Chem Soc. 2005 Dec 14;127(49):17412-20. doi: 10.1021/ja055846n.
4
Characterization of toxins within crude venoms by combined use of Fourier transform mass spectrometry and cloning.
Anal Chem. 2005 Oct 15;77(20):6630-9. doi: 10.1021/ac050575k.
5
Synthesis and structure-activity relationships of novel benzene sulfonamides with potent binding affinity for bovine carbonic anhydrase II.
Bioorg Med Chem Lett. 2005 Dec 15;15(24):5429-33. doi: 10.1016/j.bmcl.2005.08.113. Epub 2005 Oct 6.
6
Screening a natural product-based combinatorial library using FTICR mass spectrometry.使用傅里叶变换离子回旋共振质谱法筛选基于天然产物的组合文库。
Bioorg Med Chem. 2006 Jan 15;14(2):510-5. doi: 10.1016/j.bmc.2005.08.030. Epub 2005 Sep 29.
7
Ligand amplification in a dynamic combinatorial glycopeptide library.
Chem Commun (Camb). 2005 Sep 14(34):4264-6. doi: 10.1039/b507674a. Epub 2005 Aug 9.
8
Carbonic anhydrase inhibitors: synthesis and inhibition of cytosolic/membrane-associated carbonic anhydrase isozymes I, II, and IX with sulfonamides incorporating hydrazino moieties.碳酸酐酶抑制剂:含肼基部分的磺酰胺类化合物对胞质/膜相关碳酸酐酶同工酶I、II和IX的合成及抑制作用
J Med Chem. 2005 Mar 24;48(6):2121-5. doi: 10.1021/jm0494826.
9
Dynamic combinatorial chemistry: lysozyme selects an aromatic motif that mimics a carbohydrate residue.
Angew Chem Int Ed Engl. 2005 Jan 28;44(6):965-9. doi: 10.1002/anie.200462150.
10
Evaluation of automated nano-electrospray mass spectrometry in the determination of non-covalent protein-ligand complexes.自动纳米电喷雾质谱法在非共价蛋白质-配体复合物测定中的评估
Rapid Commun Mass Spectrom. 2004;18(24):3061-7. doi: 10.1002/rcm.1728.