Karafyllidis Ioannis G, Lagoudas Dimitris C
Department of Electrical and Computer Engineering, Democritus University of Thrace, GR-671 00 Xanthi, Greece.
Biosystems. 2007 Mar;88(1-2):137-46. doi: 10.1016/j.biosystems.2006.05.003. Epub 2006 Jun 27.
Microtubules are polymers of tubulin subunits (dimers) arranged on a hexagonal lattice. Each tubulin dimer comprises two monomers, the alpha-tubulin and beta-tubulin, and can be found in two states. In the first state a mobile negative charge is located into the alpha-tubulin monomer and in the second into the beta-tubulin monomer. Each tubulin dimer is modeled as an electrical dipole coupled to its neighbors by electrostatic forces. The location of the mobile charge in each dimer depends on the location of the charges in the dimer's neighborhood. Mechanical forces that act on the microtubule affect the distances between the dimers and alter the electrostatic potential. Changes in this potential affect the mobile negative charge location in each dimer and the charge distribution in the microtubule. The net effect is that mechanical forces affect the charge distribution in microtubules. We propose to exploit this effect and use microtubules as mechanical force sensors. We model each dimer as a two-state quantum system and, following the quantum computation paradigm, we use discrete quantum random walk on the hexagonal microtubule lattice to determine the charge distribution. Different forces applied on the microtubule are modeled as different coin biases leading to different probability distributions of the quantum walker location, which are directly connected to different charge distributions. Simulation results show that there is a strong indication that microtubules can be used as mechanical force sensors and that they can also detect the force directions and magnitudes.
微管是由微管蛋白亚基(二聚体)排列成六边形晶格的聚合物。每个微管蛋白二聚体包含两个单体,即α-微管蛋白和β-微管蛋白,并且可以处于两种状态。在第一种状态下,一个移动负电荷位于α-微管蛋白单体中,在第二种状态下位于β-微管蛋白单体中。每个微管蛋白二聚体被建模为一个通过静电力与其相邻分子耦合的电偶极子。每个二聚体中移动电荷的位置取决于二聚体邻域中电荷的位置。作用在微管上的机械力会影响二聚体之间的距离,并改变静电势。这种势的变化会影响每个二聚体中移动负电荷的位置以及微管中的电荷分布。最终结果是机械力会影响微管中的电荷分布。我们建议利用这种效应,并将微管用作机械力传感器。我们将每个二聚体建模为一个二态量子系统,并遵循量子计算范式,在六边形微管晶格上使用离散量子随机游走确定电荷分布。施加在微管上的不同力被建模为不同的硬币偏差,导致量子游走者位置的不同概率分布,这些分布直接与不同的电荷分布相关。模拟结果表明,有强烈迹象表明微管可以用作机械力传感器,并且它们还可以检测力的方向和大小。