Georgieva I, Trendafilova N, Rodríguez-Santiago L, Sodupe M
Institute of General and Inorganic Chemistry, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria.
J Phys Chem A. 2005 Jun 30;109(25):5668-76. doi: 10.1021/jp050626h.
The coordination of Cu2+ by glyoxilic acid oxime (gao)--the oxime analogue of glycine amino acid--and its deprotonated (gao- and gao2-) species has been studied with different density functional methods. Single-point calculations have also been carried out at the single- and double- (triple) excitation coupled-cluster (CCSD(T)) level of theory. The isomers studied involve coordination of Cu2+ to electron-rich sites (O,N) of neutral, anionic, and dianionic gao species in different conformations. In contrast to Cu2+-glycine, for which the ground-state structure is bidentate with the CO2(-) terminus of zwitterionic glycine, for Cu2+-gao the most stable isomer shows monodentate binding of Cu2+ with the carbonylic oxygen of the neutral form. The most stable complexes of Cu2+ interacting with deprotonated gao species (gao- and gao2-) also take place through the carboxylic oxygens but in a bidentate manner. The results with different functionals show that, for these open shell (Cu2+-L) systems, the relative stability of complexes with different coordination environments (and so, different spin distribution) can be quite sensitive to the amount of "Hartree-Fock" exchange included in the functional. Among all the functionals tested in this work, the BHandHLYP is the one that better compares to CCSD(T) results.
已使用不同的密度泛函方法研究了乙醛酸肟(甘氨酸氨基酸的肟类似物,简称gao)及其去质子化物种(gao⁻和gao²⁻)与Cu²⁺的配位情况。还在单激发和双(三)激发耦合簇(CCSD(T))理论水平上进行了单点计算。所研究的异构体涉及Cu²⁺与不同构象的中性、阴离子和二价阴离子gao物种的富电子位点(O、N)的配位。与Cu²⁺-甘氨酸不同,其基态结构是两性离子甘氨酸的CO₂⁻末端以双齿形式配位,而对于Cu²⁺-gao,最稳定的异构体显示Cu²⁺与中性形式的羰基氧以单齿形式结合。Cu²⁺与去质子化的gao物种(gao⁻和gao²⁻)相互作用形成的最稳定配合物也通过羧基氧以双齿方式发生。不同泛函的计算结果表明,对于这些开壳层(Cu²⁺-L)体系,具有不同配位环境(即不同自旋分布)的配合物的相对稳定性对泛函中包含的“哈特里-福克”交换量可能相当敏感。在本工作中测试的所有泛函中,BHandHLYP与CCSD(T)结果的比较最为吻合。