OrderedList——一个用于检测有序基因列表中相似性的生物导体软件包。

OrderedList--a bioconductor package for detecting similarity in ordered gene lists.

作者信息

Lottaz Claudio, Yang Xinan, Scheid Stefanie, Spang Rainer

机构信息

Department of Computational Molecular Biology, Max Planck Institute for Molecular Genetics Ihnestrasse 63-73, D-14195 Berlin, Germany.

出版信息

Bioinformatics. 2006 Sep 15;22(18):2315-6. doi: 10.1093/bioinformatics/btl385. Epub 2006 Jul 14.

DOI:10.1093/bioinformatics/btl385

PMID:16844712

Abstract

UNLABELLED

OrderedList is a Bioconductor compliant package for meta-analysis based on ordered gene lists like those resulting from differential gene expression analysis. Our package quantifies the similarity between gene lists. The significance of the similarity score is estimated from random scores computed on perturbed data. OrderedList illustrates list similarity in intuitive plots and determines the score-driving genes for further analysis.

摘要

未标注

OrderedList是一个符合Bioconductor标准的软件包，用于基于有序基因列表（如差异基因表达分析产生的列表）进行荟萃分析。我们的软件包可量化基因列表之间的相似性。相似性得分的显著性是根据对扰动数据计算的随机得分来估计的。OrderedList在直观的图表中展示列表相似性，并确定用于进一步分析的得分驱动基因。

可用性

http://www.bioconductor.org

联系方式

claudio.lottaz@molgen.mpg.de

补充信息

请访问我们的网页http://compdiag.molgen.mpg.de/software 。

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OrderedList——一个用于检测有序基因列表中相似性的生物导体软件包。

OrderedList--a bioconductor package for detecting similarity in ordered gene lists.

作者信息

机构信息

出版信息

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