Xi Zhen, Yu Zhihong, Niu Congwei, Ban Shurong, Yang Guangfu
State Key Laboratory of Elemento-Organic Chemistry and Department of Chemical Biology, Nankai University, Tianjin, People's Republic of China, 300071.
J Comput Chem. 2006 Oct;27(13):1571-6. doi: 10.1002/jcc.20464.
Quantitative structure-activity relationship (QSAR) analysis has become one of the most effective approaches for optimizing lead compounds and designing new drugs. Although large number of quantum-chemical descriptors were defined and applied successfully, it is still a big challenge to develop a general quantum-chemical descriptor describing the bulk effects more directly and effectively. In this article, we defined a general quantum-chemical descriptor by characterizing the volume of electron cloud for specific substituent using the method of density functional theory. The application of our defined steric descriptors in the QSAR analysis of sulfonylurea analogues resulted in four QSAR models with high quality (the best model: q2 = 0.881, r2 = 0.901, n = 35, s = 0.401, F = 68.44), which indicated that this descriptor may provide an effective way for solving the problem how to directly describe steric effect in quantum chemistry-based QSAR studies.
定量构效关系(QSAR)分析已成为优化先导化合物和设计新药的最有效方法之一。尽管定义并成功应用了大量量子化学描述符,但开发一种能更直接、有效地描述整体效应的通用量子化学描述符仍是一项巨大挑战。在本文中,我们使用密度泛函理论方法,通过表征特定取代基的电子云体积定义了一种通用量子化学描述符。我们定义的空间描述符在磺酰脲类似物的QSAR分析中的应用产生了四个高质量的QSAR模型(最佳模型:q2 = 0.881,r2 = 0.901,n = 35,s = 0.401,F = 68.44),这表明该描述符可能为解决如何在基于量子化学的QSAR研究中直接描述空间效应这一问题提供一种有效方法。