Chi Seung-Wook, Kim Do-Hyoung, Kim Jae-Sung, Lee Myung Kyu, Han Kyou-Hoon
Molecular Cancer Research Center, Division of Molecular Therapeutics, Korea Research Institute of Bioscience and Biotechnology, Yusong P.O. Box 115, Daejon, Korea.
Antiviral Res. 2006 Dec;72(3):207-15. doi: 10.1016/j.antiviral.2006.06.009. Epub 2006 Jul 7.
We have determined the solution conformation of the major B cell epitope (residues 123-145, adrl23 hereafter) in the preS2 region of hepatitis B virus known to be associated with infection neutralization. The adrl23 shows an "L" shaped helix-turn-helix topology with two beta-turns formed by residues Ala(130)-Asp(133) and Asp(133)-Val(136) intervening the N- and C-terminal helices. The N-terminal alpha-helix consists of residues Ser(124)-Gln(129) whereas the C-terminal 3(10) helix is formed by residues Val(136)-Tyr(140). The beta-turns overlap partially with the putative "conformational" epitope. The overall topology of adrl23 is primarily maintained by hydrophobic interactions involving Phe(127), Leu(131), Leu(132), Val(136), and Tyr(140) that are clustered on one side of the molecule. An additional hydrophobic stabilization comes from Phe(141) that is buried inside the concave side of the molecule. A network of hydrogen bonds formed among Thr(125), His(128), and Arg(137) further contribute to the "boomerang-shaped" architecture of adrl23. The N-terminus of adrl23 is immobile due to a hydrogen bond between the N-terminal amide proton of Asn(123) and the hydroxyl oxygen of Thr(126). The side chains of Asp(133), Arg(135), Val(136), Leu(139), and Tyr(140) that were shown to be important for binding to a monoclonal antibody H8 mAb are surface exposed.
我们已确定乙型肝炎病毒前S2区域中主要B细胞表位(残基123 - 145,以下简称adrl23)的溶液构象,该表位已知与感染中和相关。adrl23呈现出“L”形螺旋 - 转角 - 螺旋拓扑结构,由Ala(130) - Asp(133)和Asp(133) - Val(136)残基形成两个β转角,介于N端和C端螺旋之间。N端α螺旋由Ser(124) - Gln(129)残基组成,而C端3(10)螺旋由Val(136) - Tyr(140)残基形成。β转角部分与推定的“构象”表位重叠。adrl23的整体拓扑结构主要由涉及Phe(127)、Leu(131)、Leu(132)、Val(136)和Tyr(140)的疏水相互作用维持,这些残基聚集在分子的一侧。额外的疏水稳定作用来自埋在分子凹面内的Phe(141)。Thr(125)、His(128)和Arg(137)之间形成的氢键网络进一步促成了adrl23的“回飞棒形”结构。由于Asn(123)的N端酰胺质子与Thr(126)的羟基氧之间形成氢键,adrl23的N端不可移动。已证明对单克隆抗体H8 mAb结合重要的Asp(133)、Arg(135)、Val(136)、Leu(139)和Tyr(140)的侧链暴露于表面。