Zhang Wenjun, Barrion Albert
Research Institute of Entomology, School of Life Sciences, Zhongshan University, Guangzhou 510275, P.R. China.
Environ Monit Assess. 2006 Nov;122(1-3):185-201. doi: 10.1007/s10661-005-9173-6. Epub 2006 Aug 1.
Biodiversity studies in ecology often begin with the fitting and documentation of sampling data. This study is conducted to make function approximation on sampling data and to document the sampling information using artificial neural network algorithms, based on the invertebrate data sampled in the irrigated rice field. Three types of sampling data, i.e., the curve species richness vs. the sample size, the curve rarefaction, and the curve mean abundance of newly sampled species vs.the sample size, are fitted and documented using BP (Backpropagation) network and RBF (Radial Basis Function) network. As the comparisons, The Arrhenius model, and rarefaction model, and power function are tested for their ability to fit these data. The results show that the BP network and RBF network fit the data better than these models with smaller errors. BP network and RBF network can fit non-linear functions (sampling data) with specified accuracy and don't require mathematical assumptions. In addition to the interpolation, BP network is used to extrapolate the functions and the asymptote of the sampling data can be drawn. BP network cost a longer time to train the network and the results are always less stable compared to the RBF network. RBF network require more neurons to fit functions and generally it may not be used to extrapolate the functions. The mathematical function for sampling data can be exactly fitted using artificial neural network algorithms by adjusting the desired accuracy and maximum iterations. The total numbers of functional species of invertebrates in the tropical irrigated rice field are extrapolated as 140 to 149 using trained BP network, which are similar to the observed richness.
生态学中的生物多样性研究通常始于对采样数据的拟合和记录。本研究基于灌溉稻田中采样的无脊椎动物数据,利用人工神经网络算法对采样数据进行函数逼近并记录采样信息。使用BP(反向传播)网络和RBF(径向基函数)网络对三种类型的采样数据进行拟合和记录,即物种丰富度与样本量的曲线、稀疏度曲线以及新采样物种的平均丰度与样本量的曲线。作为比较,测试了阿伦尼乌斯模型、稀疏度模型和幂函数对这些数据的拟合能力。结果表明,BP网络和RBF网络比这些模型能更好地拟合数据,误差更小。BP网络和RBF网络能够以指定的精度拟合非线性函数(采样数据),且不需要数学假设。除了插值,BP网络还用于外推函数并绘制采样数据的渐近线。与RBF网络相比,BP网络训练网络所需时间更长,结果也总是不太稳定。RBF网络需要更多的神经元来拟合函数,通常不能用于外推函数。通过调整期望精度和最大迭代次数,利用人工神经网络算法可以精确拟合采样数据的数学函数。使用训练好的BP网络推断热带灌溉稻田中无脊椎动物功能物种的总数为140至149,这与观察到的丰富度相似。