Kurahashi Midori, Yokota Akira
Institute of Molecular and Cellular Biosciences, The University of Tokyo, Yayoi 1-1-1, Tokyo 113-0032, Japan.
Syst Appl Microbiol. 2007 Apr;30(3):202-6. doi: 10.1016/j.syapm.2006.07.003. Epub 2006 Aug 10.
A Gram-negative, strictly aerobic, rod-formed bacterium, strain MKT110(T), was isolated from a mollusk, the sea slug Elysia ornata collected in seawater off the coast of Izu-Miyake Island, Japan at a depth of 15m. Comparative 16S rRNA gene sequences analysis indicated that the isolate MKT110(T) constituted a novel lineage in gamma-proteobacteria related to the genera Zooshikella, Oceanospirillum, Microbulbifer, Marinobacter, Saccharospirillum and Pseudomonas. The strain MKT110(T) was closely related to the clones from marine sponge Halichondria okadai (AB054136, AB054161) and the coral Pocillopora damicornis (AY700600, AY700601). The phylogenetic tree based on the 16S rRNA gene sequences showed that MKT110(T) and four clones formed a sub-lineage related to the genus Zooshikella, with a bootstrap value of 100%. MKT110(T) required salt for its growth and was mesophilic. The bacterium contained 16:1omega7c, 16:0 and 14:0 as major cellular fatty acids, and 3-OH 14:0, 3-OH 10:0 and 3-OH 12:0 as major hydroxy fatty acids. The DNA base composition of the isolate was 50.4 mol% G+C. The major quinone was Q-9. The bacterium is distinguished from currently recognized bacterial genera based on phylogenetic and phenotypic features and should be classified in a novel genus for which the name Endozoicomonas elysicola gen. nov., sp. nov. is proposed. (type strain MKT110(T)=IAM 15107(T)=KCTC 12372(T); GenBank accession no. AB196667).
从日本伊豆诸岛海岸外15米深处采集的软体动物——海蛞蝓华丽多彩海兔中分离出了一株革兰氏阴性、严格需氧、杆状的细菌,菌株MKT110(T)。16S rRNA基因序列比较分析表明,分离株MKT110(T)在γ-变形菌纲中构成了一个与佐氏菌属、海洋螺菌属、微小杆菌属、海杆菌属、糖螺旋菌属和假单胞菌属相关的新谱系。菌株MKT110(T)与来自海洋海绵冈村软海绵(AB054136、AB054161)和珊瑚鹿角杯形珊瑚(AY700600、AY700601)的克隆关系密切。基于16S rRNA基因序列构建的系统发育树显示,MKT110(T)和四个克隆形成了一个与佐氏菌属相关的亚谱系,自展值为100%。MKT110(T)生长需要盐,且为嗜温菌。该细菌的主要细胞脂肪酸为16:1ω7c、16:0和14:0,主要羟基脂肪酸为3-OH 14:0、3-OH 10:0和3-OH 12:0。该分离株的DNA碱基组成为50.4 mol% G+C。主要醌为Q-9。基于系统发育和表型特征,该细菌与目前已认可的细菌属不同,应归入一个新属,为此提议将其命名为内共生海兔菌属(Endozoicomonas elysicola),新种。(模式菌株MKT110(T)=IAM 15107(T)=KCTC 12372(T);GenBank登录号AB196667)