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激烈火球菌甲醛铁氧化还原蛋白氧化还原酶中钨与铁硫辅基的氧化还原化学

Redox chemistry of tungsten and iron-sulfur prosthetic groups in Pyrococcus furiosus formaldehyde ferredoxin oxidoreductase.

作者信息

Bol Emile, Bevers Loes E, Hagedoorn Peter-Leon, Hagen Wilfred R

机构信息

Department of Biotechnology, Delft University of Technology, Julianalaan 67, 2628 BC, Delft, The Netherlands.

出版信息

J Biol Inorg Chem. 2006 Nov;11(8):999-1006. doi: 10.1007/s00775-006-0155-0. Epub 2006 Aug 22.

Abstract

Formaldehyde oxidoreductase (FOR) is one of the tungstopterin iron-sulfur enzymes of the five-membered family of aldehyde oxidoreductases in the hyperthermophilic archaeon Pyrococcus furiosus. In dye-mediated equilibrium redox titrations, the tungsten in active P. furiosus FOR is a two-electron acceptor, W(VI/IV). The intermediate, paramagnetic W(V) state can be trapped only by reduction with substrate, with consecutive one-electron intraprotein electron transfer to the single 4Fe-4S cluster and partial comproportionation of the tungsten over W(IV, V, VI); this is a stable state in the absence of an external electron acceptor. Electron paramagnetic resonance (EPR) spectroscopy reveals a single "low-potential" W(V) spectrum with gxyz values 1.847, 1.898, and 1.972, and a [4Fe-4S]+ cubane in a spin mixture of S = 1/2 (10%) and S = 3/2 (90%) of intermediate rhombicity (E/D = 0.21, greal = 1.91). The development of this intermediate in vitro is slow even at elevated temperature and with a nominal 50:1 excess of substrate over enzyme presumably owing to the very unfavorable hydration equilibrium of the formaldehyde/methylene glycol couple with KD approximately 10(3). Rapid intermediate formation of enzyme at concentrations suitable for EPR spectroscopy (200 microM) is only obtained with extremely high nominal substrate concentration (1 M formaldehyde) and is followed by a slower phase of denaturation. The premise that the free formaldehyde, and not the methylene glycol, is the enzyme's substrate implies that KM for formaldehyde is 3 orders of magnitude less that the previously reported value.

摘要

甲醛氧化还原酶(FOR)是嗜热古菌激烈火球菌中醛氧化还原酶五元家族的钨蝶呤铁硫酶之一。在染料介导的平衡氧化还原滴定中,活性激烈火球菌FOR中的钨是一个双电子受体,W(VI/IV)。中间的顺磁性W(V)态只能通过底物还原捕获,随后单电子在蛋白质内部转移到单个4Fe-4S簇,并使钨在W(IV、V、VI)之间发生部分交错反应;在没有外部电子受体的情况下,这是一个稳定状态。电子顺磁共振(EPR)光谱揭示了一个单一的“低电位”W(V)光谱,其gxyz值分别为1.847、1.898和1.972,以及一个处于中间菱形度(E/D = 0.21,greal = 1.91)的S = 1/2(10%)和S = 3/2(90%)自旋混合物中的[4Fe-4S]+立方烷。即使在高温下,且底物与酶的名义过量比为50:1时,这种中间体在体外的形成也很缓慢,这可能是由于甲醛/亚甲基二醇对的水合平衡非常不利,其KD约为10(3)。只有在极高的名义底物浓度(1 M甲醛)下,才能在适合EPR光谱分析的浓度(200 microM)下快速形成酶中间体,随后是较慢的变性阶段。游离甲醛而非亚甲基二醇是该酶底物这一前提意味着甲醛的KM比先前报道的值小3个数量级。

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