Jakobsen Trine Fredlund, Kjeldsen Kasper Urup, Ingvorsen Kjeld
Department of Microbiology, University of Aarhus, Ny Munkegade Building 1540, DK-8000 Aarhus C, Denmark.
Int J Syst Evol Microbiol. 2006 Sep;56(Pt 9):2063-2069. doi: 10.1099/ijs.0.64323-0.
A novel moderately halophilic, sulfate-reducing bacterium, strain EtOH3(T), was isolated from anoxic hypersaline (270 g NaCl l(-1)) sediment of the northern arm of the Great Salt Lake, Utah, USA. Cells of strain EtOH3(T) were oval to rod-shaped, non-motile, non-sporulating and stained Gram-negative. The strain required sodium and magnesium ions for growth and grew at salinities of up to 240 g NaCl l(-1) and 121 g MgCl(2).6H(2)O l(-1). The optimum NaCl concentration was 80-100 g l(-1). Strain EtOH3(T) grew at temperatures ranging from 15 to 44 degrees Celsius (optimum 37 degrees Celsius). The pH range for growth was 6.5-8.3 (optimum around pH 6.8). Only sulfate and thiosulfate served as electron acceptors for a broad range of electron donors including various short-chain fatty acids and primary (C(1-5)) alcohols, amino acids, H(2)/acetate and H(2)/yeast extract. The G+C content of the genomic DNA was 51.4 mol%. Phylogenetic analysis of dsrAB [genes encoding the major subunits of dissimilatory (bi)sulfite reductase] and 16S rRNA gene sequence data placed strain EtOH3(T) within the deltaproteobacterial family Desulfohalobiaceae. Strain EtOH3(T) shared 76 and 91 % dsrAB and 16S rRNA gene sequence similarity, respectively, with the type strain of the phylogenetically most closely related species with a validly published name, Desulfohalobium retbaense DSM 5692(T). High 16S rRNA gene sequence similarity ( approximately 97 %) was shared with the recently described strain 'Desulfovermiculus halophilus' VKM B-2364. Strain EtOH3(T), however, clearly differed from this strain in both genomic G+C content and in several of its phenotypic properties. On the basis of phenotypic and genotypic characteristics, the novel species Desulfohalobium utahense sp. nov. is proposed, with strain EtOH3(T) (=VKM B-2384(T)=DSM 17720(T)) as the type strain.
从美国犹他州大盐湖北部缺氧高盐(270 g NaCl l⁻¹)沉积物中分离出一株新型中度嗜盐硫酸盐还原菌,菌株EtOH3(T)。菌株EtOH3(T)的细胞呈椭圆形至杆状,无运动性,不产芽孢,革兰氏染色阴性。该菌株生长需要钠离子和镁离子,在NaCl浓度高达240 g l⁻¹和MgCl₂·6H₂O浓度为121 g l⁻¹的盐度下均可生长。最适NaCl浓度为80 - 100 g l⁻¹。菌株EtOH3(T)在15至44摄氏度(最适37摄氏度)的温度范围内生长。生长的pH范围为6.5 - 8.3(最适pH约为6.8)。只有硫酸盐和硫代硫酸盐可作为多种电子供体的电子受体,这些电子供体包括各种短链脂肪酸和伯醇(C₁₋₅)、氨基酸、H₂/乙酸盐以及H₂/酵母提取物。基因组DNA的G + C含量为51.4 mol%。对dsrAB(编码异化(双)亚硫酸盐还原酶主要亚基的基因)和16S rRNA基因序列数据进行系统发育分析,将菌株EtOH3(T)置于δ-变形菌纲脱硫嗜盐菌科内。菌株EtOH3(T)与具有有效发表名称的系统发育关系最密切的物种脱硫嗜盐脱硫弧菌DSM 5692(T)的模式菌株的dsrAB和16S rRNA基因序列相似性分别为76%和91%。与最近描述的菌株“嗜盐脱硫微菌”VKM B - 2364具有较高的16S rRNA基因序列相似性(约97%)。然而,菌株EtOH3(T)在基因组G + C含量及其一些表型特征方面与该菌株明显不同。基于表型和基因型特征,提出了新物种犹他脱硫嗜盐菌(Desulfohalobium utahense sp. nov.),以菌株EtOH3(T)(=VKM B - 2384(T)=DSM 17720(T))作为模式菌株。