Suppr超能文献

在空间位阻铁-萨伦配合物中,由外部水配体诱导产生的三角双锥几何结构,与原儿茶酸3,4-双加氧酶的活性位点相关。

Trigonal-bipyramidal geometry induced by an external water ligand in a sterically hindered iron salen complex, related to the active site of protocatechuate 3,4-dioxygenase.

作者信息

Kurahashi Takuya, Oda Kenji, Sugimoto Manabu, Ogura Takashi, Fujii Hiroshi

机构信息

Institute for Molecular Science & Okazaki Institute for Integrative Bioscience, National Institutes of Natural Sciences, Myodaiji, Okazaki 444-8787, Japan.

出版信息

Inorg Chem. 2006 Sep 18;45(19):7709-21. doi: 10.1021/ic060650p.

Abstract

A unique distorted trigonal-bipyramidal geometry observed for the non-heme iron center in protocatechuate 3,4-dioxygenase (3,4-PCD) was carefully examined utilizing a sterically hindered iron salen complex, which well reproduces the endogenous His2Tyr2 donor set with water as an external ligand. X-ray crystal structures of a series of iron model complexes containing bis(3,5-dimesitylsalicylidene)-1,2-dimesitylethylenediamine indicate that a distorted trigonal-bipyramidal geometry is achieved upon binding of water as an external ligand. The extent of a structural change of the iron center from a preferred square-pyramidal to a distorted trigonal-bipyramidal geometry varies with the external ligand that is bound in the order Cl << EtO < H2O, which is consistent with the spectrochemical series. The distortion in the model system is not due to steric repulsions but electronic interactions between the external ligand and the iron center, as evidenced from the X-ray crystal structures of another series of iron model complexes with a less-hindered bis(3-xylylsalicylidene)-1,2-dimesitylethylenediamine ligand, as well as by density functional theory calculations. Further spectroscopic investigations indicate that a unique distorted trigonal-bipyramidal geometry is indeed maintained even in solution. The present model study provides a new viewpoint that a unique distorted trigonal-bipyramidal iron site might not be preorganized by a 3,4-PCD protein but could be electronically induced upon the binding of an external hydroxide ligand to the iron(III) center. The structural change induced by the external water ligand is also discussed in relation to the reaction mechanism of 3,4-PCD.

摘要

利用一种空间位阻铁席夫碱配合物,仔细研究了原儿茶酸3,4-双加氧酶(3,4-PCD)中非血红素铁中心独特的扭曲三角双锥几何结构,该配合物能很好地模拟以内源性His2Tyr2为供体组且以水作为外部配体的情况。一系列含有双(3,5-二叔丁基水杨醛)-1,2-二叔丁基乙二胺的铁模型配合物的X射线晶体结构表明,当水作为外部配体结合时,会形成扭曲的三角双锥几何结构。铁中心从优选的四方锥几何结构转变为扭曲的三角双锥几何结构的结构变化程度随结合的外部配体而变化,顺序为Cl << EtO < H2O,这与光谱化学序列一致。模型体系中的畸变不是由于空间排斥,而是外部配体与铁中心之间的电子相互作用,这从另一系列具有较小位阻的双(3-二甲苯水杨醛)-1,2-二叔丁基乙二胺配体的铁模型配合物的X射线晶体结构以及密度泛函理论计算中得到证明。进一步的光谱研究表明,即使在溶液中也确实保持着独特的扭曲三角双锥几何结构。本模型研究提供了一个新的观点,即独特的扭曲三角双锥铁位点可能不是由3,4-PCD蛋白预先组织的,而是在外部氢氧化物配体与铁(III)中心结合时通过电子诱导产生的。还讨论了外部水配体引起的结构变化与3,4-PCD反应机制的关系。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验