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碱基及酶催化4-羟基苯甲酰辅酶A水解的构效关系分析

Structure-activity analysis of base and enzyme-catalyzed 4-hydroxybenzoyl coenzyme A hydrolysis.

作者信息

Song Feng, Zhuang Zhihao, Dunaway-Mariano Debra

机构信息

Department of Chemistry, University of New Mexico, Albuquerque, NM 87131, USA.

出版信息

Bioorg Chem. 2007 Feb;35(1):1-10. doi: 10.1016/j.bioorg.2006.07.002. Epub 2006 Sep 7.

Abstract

In this study, the second-order rate constant k2 of base-catalyzed hydrolysis and the values of kcat, Km and kcat/Km of wild-type Pseudomonas sp. CBS3 4-hydroxybenzoyl coenzyme A (4-HBA-CoA) thioesterase-catalyzed hydrolysis of 4-HBA-CoA and its para-substituted analogs were measured. For the base-catalyzed hydrolysis, the plot of logk2 vs the sigma value of the para-substituents was linear with a slope (rho) of 1.5. In the case of the enzyme-catalyzed hydrolysis, the kcat/Km values measured for the para-substituted analogs defined substrate specificity. Asp32 was shown to play a key role in substrate recognition, and in particular, in the discrimination between the targeted substrate and other cellular benzoyl-CoA thioesters.

摘要

在本研究中,测定了野生型假单胞菌CBS3的碱催化水解二级速率常数k2以及4-羟基苯甲酰辅酶A(4-HBA-CoA)硫酯酶催化4-HBA-CoA及其对位取代类似物水解的kcat、Km和kcat/Km值。对于碱催化水解,logk2与对位取代基的σ值作图呈线性,斜率(ρ)为1.5。在酶催化水解的情况下,对位取代类似物的kcat/Km值确定了底物特异性。Asp32在底物识别中起关键作用,特别是在区分目标底物与其他细胞内苯甲酰辅酶A硫酯方面。

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