Barrio Manuel, Burrage Kevin, Leier André, Tian Tianhai
Departamento de Informática, Universidad de Valladolid, Valladolid, Spain.
PLoS Comput Biol. 2006 Sep 8;2(9):e117. doi: 10.1371/journal.pcbi.0020117. Epub 2006 Jul 25.
Discrete stochastic simulations are a powerful tool for understanding the dynamics of chemical kinetics when there are small-to-moderate numbers of certain molecular species. In this paper we introduce delays into the stochastic simulation algorithm, thus mimicking delays associated with transcription and translation. We then show that this process may well explain more faithfully than continuous deterministic models the observed sustained oscillations in expression levels of hes1 mRNA and Hes1 protein.
当特定分子种类数量处于小到中等规模时,离散随机模拟是理解化学动力学动态的有力工具。在本文中,我们将延迟引入随机模拟算法,从而模拟与转录和翻译相关的延迟。然后我们表明,与连续确定性模型相比,这个过程可能更忠实地解释了观察到的hes1 mRNA和Hes1蛋白表达水平的持续振荡。