Bordbar Abdol-Khalegh, Mousavi Sayed Habib-Allah, Dazhampanah Hamid
Laboratory of Biophysical Chemistry, Department of Chemistry, Isfahan University, Isfahan, Iran.
Acta Biochim Pol. 2006;53(3):563-8. Epub 2006 Oct 1.
The binding data for oxygenation of human hemoglobin, Hb, at various temperatures and in the absence and presence of 2,3-diphosphoglycerate, DPG, and inositol hexakis phosphate, IHP, were analyzed for extraction of mean intrinsic Gibbs free energy, DeltaGo, enthalpy, DeltaHo, and entropy, DeltaSo, of binding at various partial oxygen pressures. This method of analysis considers all the protein species present such as dimer and tetramer forms which were not considered by Imai et al. (Imai K et al., 1970, Biochim Biophys Acta 200: 189-196), in their analysis which was based on Adair equation. In this regard, the values of Hill equation parameters were estimated with high precision at all points of the binding curve and used for calculation of DeltaGo, DeltaHo and DeltaSo were also calculated by analysis of DeltaGo values at various temperatures using van't Hoff equation. The results represent the enthalpic nature of the cooperativity in Hb oxygenation and the compensation effect of intrinsic entropy. The interpretation of results also to be, into account the decrease of the binding affinity of sites for oxygen in the presence of DPG and IHP without any considerable changes in the site-site interaction (extent of cooperativity). In other words, the interactions between bound ligands, organic phosphates and oxygen, are more due to a decreasing binding affinity and not to the reduction of the cooperative interaction between sites. The results also document the more heterotropic effect of IHP compared to DPG.
分析了在不同温度下,以及在不存在和存在2,3 - 二磷酸甘油酸(DPG)和肌醇六磷酸(IHP)的情况下,人血红蛋白(Hb)氧合的结合数据,以提取在不同氧分压下结合的平均内在吉布斯自由能(ΔG°)、焓(ΔH°)和熵(ΔS°)。这种分析方法考虑了所有存在的蛋白质种类,如二聚体和四聚体形式,而Imai等人(Imai K等人,1970年,《生物化学与生物物理学报》200: 189 - 196)在基于阿代尔方程的分析中并未考虑这些。在这方面,在结合曲线的所有点上高精度地估计了希尔方程参数,并用于计算ΔG°,还通过使用范特霍夫方程分析不同温度下的ΔG°值来计算ΔH°和ΔS°。结果表明了Hb氧合协同性的焓性质以及内在熵的补偿效应。结果的解释还应考虑到在存在DPG和IHP的情况下,位点对氧的结合亲和力降低,而位点 - 位点相互作用(协同程度)没有任何显著变化。换句话说,结合配体、有机磷酸盐和氧之间的相互作用更多是由于结合亲和力的降低,而不是位点之间协同相互作用的减少。结果还证明了IHP比DPG具有更强的异促效应。