Berendsen Wouter R, Lapin Alexei, Reuss Matthias
University of Stuttgart, Institute of Biochemical Engineering (IBVT), Allmandring 31, 70569 Stuttgart, Germany.
Biotechnol Prog. 2006 Sep-Oct;22(5):1305-12. doi: 10.1021/bp060062e.
A method is proposed for identification of kinetic parameters when diffusion of substrates is limiting in reactions catalyzed by immobilized enzymes. This method overcomes conventional sequential procedures, which assume immobilization does not affect the conformation of the enzyme and, thus, consider intrinsic and inherent kinetics to be the same. The coupled equations describing intraparticle mass transport are solved simultaneously using numerical methods and are used for direct estimation of kinetic parameters by fitting modeling results to time-course measurements in a stirred tank reactor. While most traditional procedures were based on Michaelis-Menten kinetics, the method presented here is applicable to more complex kinetic mechanisms involving multiple state variables, such as ping-pong bi-bi. The method is applied to the kinetic resolution of (R/S)-1-methoxy-2-propanol with vinyl acetate catalyzed by Candida antarctica lipase B. A mathematical model is developed consisting of irreversible ping-pong bi-bi kinetics, including competitive inhibition of both enantiomers. The kinetic model, which fits to experimental data over a wide range of both substrates (5-95%) and temperatures (5-56 degrees C), is used for simulations to study typical behavior of immobilized enzyme systems.
提出了一种在固定化酶催化反应中底物扩散受限的情况下识别动力学参数的方法。该方法克服了传统的顺序程序,传统程序假定固定化不影响酶的构象,因此认为内在动力学和固有动力学是相同的。描述颗粒内质量传递的耦合方程通过数值方法同时求解,并通过将建模结果与搅拌釜反应器中的时程测量值拟合来直接估计动力学参数。虽然大多数传统程序基于米氏动力学,但这里提出的方法适用于涉及多个状态变量的更复杂的动力学机制,如乒乓双底物双产物机制。该方法应用于南极假丝酵母脂肪酶B催化的(R/S)-1-甲氧基-2-丙醇与乙酸乙烯酯的动力学拆分。建立了一个由不可逆的乒乓双底物双产物动力学组成的数学模型,包括两种对映体的竞争性抑制。该动力学模型在广泛的底物范围(5-95%)和温度范围(5-56℃)内都能拟合实验数据,用于模拟研究固定化酶系统的典型行为。