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三苯甲烷的三甲苯基和三甲苯磺酰脲衍生物二聚体中的氢键作用

Hydrogen bonding in dimers of tritolyl and tritosylurea derivatives of triphenylmethanes.

作者信息

Rudzevich Yuliya, Rudzevich Valentyn, Schollmeyer Dieter, Thondorf Iris, Böhmer Volker

机构信息

Abteilung Lehramt Chemie, Fachbereich Chemie, Pharmazie und Geowissenschaften, Johannes Gutenberg-Universität Mainz, Duesbergweg 10-14, D-55099, Mainz, Germany.

出版信息

Org Biomol Chem. 2006 Nov 7;4(21):3938-44. doi: 10.1039/b609707c. Epub 2006 Sep 5.

DOI:10.1039/b609707c
PMID:17047873
Abstract

The crystal structure of the homodimer formed by the tritolylurea 3a proves the existence of a belt of six bifurcated hydrogen bonds between both NH and the O=C groups of the adjacent urea residues. For the tritosylurea 3b, four additional three-center hydrogen bonds, also involving the SO2 oxygen, are found in the crystalline state. Molecular dynamics simulations in a chloroform box confirm these patterns of the hydrogen bonds and the resulting elongation of the dimer 3b. 3b in comparison to 3a x 3a. The calculated complexation energies for the three dimeric combinations are nearly identical in agreement with the simultaneous formation of heterodimer 3a x 3b in a mixture of 3a and 3b.

摘要

由三对甲苯基脲3a形成的同二聚体的晶体结构证明,相邻脲残基的NH和O = C基团之间存在一条由六个分叉氢键组成的带。对于三对甲苯磺酰脲3b,在结晶状态下发现了另外四个三中心氢键,其中也涉及SO2氧。在氯仿盒中的分子动力学模拟证实了这些氢键模式以及由此导致的二聚体3b与3a×3a相比的伸长。三种二聚体组合的计算络合能几乎相同,这与在3a和3b的混合物中同时形成异二聚体3a×3b一致。

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