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来自苏云金芽孢杆菌的群体感应淬灭金属γ-内酯酶表现出离去基团硫效应。

The quorum-quenching metallo-gamma-lactonase from Bacillus thuringiensis exhibits a leaving group thio effect.

作者信息

Momb Jessica, Thomas Pei W, Breece Robert M, Tierney David L, Fast Walter

机构信息

Division of Medicinal Chemistry, College of Pharmacy, and Graduate Program in Biochemistry, University of Texas, Austin, Texas 78712, USA.

出版信息

Biochemistry. 2006 Nov 7;45(44):13385-93. doi: 10.1021/bi061238o.

Abstract

Lactone-hydrolyzing enzymes derived from some Bacillus species are capable of disrupting quorum sensing in bacteria that use N-acyl-l-homoserine lactones (AHLs) as intercellular signaling molecules. Despite the promise of these quorum-quenching enzymes as therapeutic and anti-biofouling agents, the ring opening mechanism and the role of metal ions in catalysis have not been elucidated. Labeling studies using (18)O, (2)H, and the AHL lactonase from Bacillus thuringiensis implicate an addition-elimination pathway for ring opening in which a solvent-derived oxygen is incorporated into the product carboxylate, identifying the alcohol as the leaving group. (1)H NMR is used to show that metal binding is required to maintain proper folding. A thio effect is measured for hydrolysis of N-hexanoyl-l-homoserine lactone and the corresponding thiolactone by AHL lactonase disubstituted with alternative metal ions, including Mn(2+), Co(2+), Zn(2+), and Cd(2+). The magnitude of the thio effect on k(cat) values and the thiophilicity of the metal ion substitutions vary in parallel and are consistent with a kinetically significant interaction between the leaving group and the active site metal center during turnover. X-ray absorption spectroscopy confirms that dicobalt substitution does not result in large structural perturbations at the active site. Finally, substitution of the dinuclear metal site with Cd(2+) results in a greatly enhanced catalyst that can hydrolyze AHLs 1600-24000-fold faster than other reported quorum-quenching enzymes.

摘要

一些芽孢杆菌属物种产生的内酯水解酶能够破坏以N-酰基-L-高丝氨酸内酯(AHLs)作为细胞间信号分子的细菌中的群体感应。尽管这些群体感应淬灭酶有望成为治疗剂和抗生物污损剂,但其开环机制以及金属离子在催化中的作用尚未阐明。使用(18)O、(2)H以及苏云金芽孢杆菌的AHL内酯酶进行的标记研究表明,开环过程涉及加成-消除途径,其中溶剂衍生的氧被并入产物羧酸盐中,确定醇为离去基团。(1)H NMR用于表明金属结合对于维持正确折叠是必需的。通过用包括Mn(2+)、Co(2+)、Zn(2+)和Cd(2+)在内的替代金属离子双取代的AHL内酯酶,测量了N-己酰基-L-高丝氨酸内酯和相应硫内酯水解的硫效应。硫效应在k(cat)值上的大小以及金属离子取代的亲硫性平行变化,并且与周转过程中离去基团和活性位点金属中心之间动力学上显著的相互作用一致。X射线吸收光谱证实,双钴取代不会在活性位点导致大的结构扰动。最后,用Cd(2+)取代双核金属位点产生了一种大大增强的催化剂,其水解AHLs的速度比其他报道的群体感应淬灭酶快1600 - 24000倍。

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