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气态精氨酸构象异构体及其独特的分子内相互作用。

Gaseous arginine conformers and their unique intramolecular interactions.

作者信息

Ling Sanliang, Yu Wenbo, Huang Zhijian, Lin Zijing, Harañczyk Maciej, Gutowski Maciej

机构信息

Hefei National Laboratory for Physical Sciences at Microscale, Department of Physics, University of Science and Technology of China, Hefei, Anhui 230026, China.

出版信息

J Phys Chem A. 2006 Nov 9;110(44):12282-91. doi: 10.1021/jp0645115.

Abstract

Extensive ab initio calculations were employed to characterize stable conformers of gaseous arginine, both the canonical and zwitterionic tautomers. Step-by-step geometry optimizations of possible single-bond rotamers at the B3LYP/6-31G(d), B3LYP/6-31++G(d,p), and MP2/6-31++G(d,p) levels yield numerous structures that are more stable than any known ones. The final electronic energies of the conformers were determined at the CCSD/6-31++G(d,p) level. The lowest energies of the canonical and zwitterionic structures are lower than the existing values by 2.0 and 2.3 kcal/mol, respectively. The relative energies, rotational constants, dipole moments, and harmonic frequencies of the stable conformers remain for future experimental verification. The conformational distributions at various temperatures, estimated according to thermodynamic principles, consist almost exclusively of the newly found structures. One striking feature is the occurrence of blue-shifting hydrogen bonds in all six of the most stable conformers. A unique feature of important conformations is the coexistence of dihydrogen and blue- and red-shifting hydrogen bonds. In addition to the hydrogen bonds, the stereoelectronic effects were also found to be important stabilization factors. The calculated and measured proton affinities agree within the theoretical and experimental uncertainties, affirming the high quality of our conformational search. The theoretical gas-phase basicity of 245.9 kcal/mol is also in good agreement with the experimental value of 240.6 kcal/mol. The extensive searches establish firmly that gaseous arginine exists primarily in the canonical and not the zwitterionic form.

摘要

运用大量从头算计算来表征气态精氨酸的稳定构象异构体,包括标准互变异构体和两性离子互变异构体。在B3LYP/6 - 31G(d)、B3LYP/6 - 31++G(d,p)和MP2/6 - 31++G(d,p)水平上对可能的单键旋转异构体进行逐步几何优化,得到了许多比任何已知结构都更稳定的结构。在CCSD/6 - 31++G(d,p)水平上确定了这些构象异构体的最终电子能量。标准结构和两性离子结构的最低能量分别比现有值低2.0和2.3千卡/摩尔。稳定构象异构体的相对能量、转动常数、偶极矩和谐波频率有待未来实验验证。根据热力学原理估算的不同温度下的构象分布几乎完全由新发现的结构组成。一个显著特征是在所有六个最稳定的构象异构体中都出现了蓝移氢键。重要构象的一个独特特征是双氢键与蓝移和红移氢键共存。除了氢键外,立体电子效应也是重要的稳定因素。计算得到的质子亲和能与测量值在理论和实验误差范围内一致,证实了我们构象搜索的高质量。理论气相碱度为245.9千卡/摩尔,也与240.6千卡/摩尔的实验值高度吻合。广泛的搜索结果明确表明气态精氨酸主要以标准形式而非两性离子形式存在。

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