Rai Amareshwar Kumar, Song Ce, Lin Zijing
Hefei National Laboratory for Physical Sciences, Microscale and Department of Physics, University of Science and Technology of China, Hefei, Anhui 230026, China.
Spectrochim Acta A Mol Biomol Spectrosc. 2009 Sep 1;73(5):865-70. doi: 10.1016/j.saa.2009.04.023. Epub 2009 May 6.
An extensive exploration of the conformational space has been carried out to characterize all possible gas phase structures of leucine. A total of 324 unique trial structures for canonical leucine were generated by considering all possible combinations of single bond rotamers. All trial structures were optimized at the B3LYP/6-311G* level of the DFT method. A total of 77 unique and stationary canonical conformers were found. Further, 15 most stable conformers were reoptimized at B3LYP/6-311++G** level and their respective relative energies, vertical ionization energies, hydrogen bonding patterns, rotational constants and dipole moments were calculated. A single point energy calculations for leucine conformers have also been done at both B3LYP/6-311++G(2df, p) and MP2/6-311++G(2df, p) levels. The good agreement between our estimates of rotational constants for two most stable conformers and available experimental measurements supports the reliability of the B3LYP/6-311++G** level of theory for describing the conformational behavior of leucine molecule. The proton affinity and gas phase basicity were also determined. Using the statistical approach, conformational distributions at various temperatures have also been performed and analyzed. Vibrational spectra were also calculated. It is also observed that zwitterions of leucine are not stable in gas phase.
为了表征亮氨酸所有可能的气相结构,已对其构象空间进行了广泛探索。通过考虑单键旋转异构体的所有可能组合,生成了总共324个标准亮氨酸的独特试验结构。所有试验结构均在密度泛函理论(DFT)方法的B3LYP/6-311G*水平上进行了优化。共发现了77个独特的稳定标准构象异构体。此外,对15个最稳定的构象异构体在B3LYP/6-311++G水平上进行了重新优化,并计算了它们各自的相对能量、垂直电离能、氢键模式、转动常数和偶极矩。还在B3LYP/6-311++G(2df, p)和MP2/6-311++G(2df, p)水平上对亮氨酸构象异构体进行了单点能量计算。我们对两个最稳定构象异构体的转动常数估计值与现有实验测量值之间的良好一致性,支持了B3LYP/6-311++G理论水平用于描述亮氨酸分子构象行为的可靠性。还测定了质子亲和力和气相碱度。使用统计方法,还进行并分析了不同温度下的构象分布。计算了振动光谱。还观察到亮氨酸的两性离子在气相中不稳定。