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在线性化学结构芯片上对线粒体DNA进行低通量扩增和测序。

Low volume amplification and sequencing of mitochondrial DNA on a chemically structured chip.

作者信息

Lutz-Bonengel Sabine, Sänger Timo, Heinrich Marielle, Schön Ulrike, Schmidt Ulrike

机构信息

Institute of Legal Medicine, Albert Ludwig University Freiburg, Albertstrasse 9, 79104, Freiburg, Germany.

出版信息

Int J Legal Med. 2007 Jan;121(1):68-73. doi: 10.1007/s00414-006-0125-7. Epub 2006 Nov 9.

Abstract

Low volume (LV) amplification (1 microL) of nuclear DNA (nucDNA) on a chemically structured chip is an appropriate and highly sensitive method to simultaneously amplify amelogenin and 15 forensically relevant short tandem repeats (STR). In this study, a combined method using on-chip LV amplification of mitochondrial DNA (mtDNA) and subsequent on-chip LV cycle sequencing was established to obtain a method, which is sensitive and robust enough to allow reliable analysis of DNA amounts representing the single cell level. All the necessary steps of the procedure--except for the purification of the sequencing products--were accomplished within the same final 2-microL reaction volume.

摘要

在化学结构化芯片上对核DNA(nucDNA)进行低体积(LV)扩增(1微升)是一种合适且高度灵敏的方法,可同时扩增牙釉蛋白和15个法医相关短串联重复序列(STR)。在本研究中,建立了一种联合方法,即先在芯片上对线粒体DNA(mtDNA)进行LV扩增,随后进行芯片上的LV循环测序,以获得一种足够灵敏且稳健的方法,能够可靠地分析代表单细胞水平的DNA量。该程序的所有必要步骤——除了测序产物的纯化——均在最终2微升的相同反应体积内完成。

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