Ganguly Agneyo, Das Benu Brata, Sen Nilkantha, Roy Amit, Dasgupta Somdeb Bose, Majumder Hemanta K
Department of Molecular Parasitology, Indian Institute of Chemical Biology, 4 Raja S.C.Mullick Road, Jadavpur, Kolkata 700032, India.
Nucleic Acids Res. 2006;34(21):6286-97. doi: 10.1093/nar/gkl829. Epub 2006 Nov 10.
The active site tyrosine residue of all monomeric type IB topoisomerases resides in the C-terminal domain of the enzyme. Leishmania donovani, possesses unusual heterodimeric type IB topoisomerase. The small subunit harbors the catalytic tyrosine within the SKXXY motif. To explore the functional relationship between the two subunits, we have replaced the small subunit of L.donovani topoisomerase I with a C-terminal fragment of human topoisomerase I (HTOP14). The purified LdTOP1L (large subunit of L.donovani topoisomerase I) and HTOP14 were able to reconstitute topoisomerase I activity when mixed in vitro. This unusual enzyme, 'LeishMan' topoisomerase I (Leish for Leishmania and Man for human) exhibits less efficiency in DNA binding and strand passage compared with LdTOP1L/S. Fusion of LdTOP1L with HTOP14 yielded a more efficient enzyme with greater affinity for DNA and faster strand passage ability. Both the chimeric enzymes are less sensitive to camptothecin than LdTOP1L/S. Restoration of topoisomerase I activity by LdTOP1L and HTOP14 suggests that the small subunit of L.donovani topoisomerase I is primarily required for supplying the catalytic tyrosine. Moreover, changes in the enzyme properties due to substitution of LdTOP1S with HTOP14 indicate that the small subunit contributes to subunit interaction and catalytic efficiency of the enzyme.
所有单体I B型拓扑异构酶的活性位点酪氨酸残基位于该酶的C末端结构域。杜氏利什曼原虫拥有不同寻常的异源二聚体I B型拓扑异构酶。小亚基在SKXXY基序内含有催化性酪氨酸。为了探究这两个亚基之间的功能关系,我们用人类拓扑异构酶I(HTOP14)的C末端片段替换了杜氏利什曼原虫拓扑异构酶I的小亚基。纯化后的杜氏利什曼原虫拓扑异构酶I的大亚基(LdTOP1L)和HTOP14在体外混合时能够重建拓扑异构酶I的活性。这种不同寻常的酶,即“利什曼人”拓扑异构酶I(“利什曼”代表利什曼原虫,“人”代表人类),与LdTOP1L/S相比,在DNA结合和链穿越方面效率较低。LdTOP1L与HTOP14融合产生了一种效率更高的酶,对DNA具有更高的亲和力和更快的链穿越能力。这两种嵌合酶对喜树碱的敏感性均低于LdTOP1L/S。LdTOP1L和HTOP14对拓扑异构酶I活性的恢复表明,杜氏利什曼原虫拓扑异构酶I的小亚基主要是提供催化性酪氨酸所必需的。此外,由于用HTOP14替换LdTOP1S而导致的酶特性变化表明,小亚基有助于酶的亚基相互作用和催化效率。