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[使用NotI微阵列鉴定与宫颈癌潜在相关的基因座变化]

[Identification of changes in gene loci potentially associated with cervical cancer using NotI microarrays].

作者信息

Kashuba V I, Skripkina I Ia, Saraev D V, Gordiiuk V V, Vinnitskaia A B, Tsyba L A, Pogrebnoĭ P V, Blinov V M, Zabarovskiĭ E R, Ryndich A V

出版信息

Ukr Biokhim Zh (1999). 2006 Mar-Apr;78(2):113-20.

PMID:17100293
Abstract

The investigation of the cancer-associated structural and epigenetic changes in cell genome is a major approach for understanding mechanisms of cancerogenesis. To investigate these genome changes, novel technique of microarrays comprising NotI-linking genome clones was developed. Twenty eight samples from patients with cervical cancer were analyzed using NotI microarrays of human chromosome 3. Deletions, amplifications and methylation were detected for 109 out of 182 NotI clones with different frequency. Notably, 17 NotI-linking clones showed genomic changes in more than 35% of tumor samples investigated, which suggests involvement of genes associated with these clones in development of cervical cancer.

摘要

对细胞基因组中与癌症相关的结构和表观遗传变化进行研究是理解癌症发生机制的主要途径。为了研究这些基因组变化,开发了包含NotI连接基因组克隆的微阵列新技术。使用人类3号染色体的NotI微阵列对28例宫颈癌患者的样本进行了分析。在182个NotI克隆中的109个中检测到了不同频率的缺失、扩增和甲基化。值得注意的是,17个NotI连接克隆在超过35%的研究肿瘤样本中显示出基因组变化,这表明与这些克隆相关的基因参与了宫颈癌的发生发展。

相似文献

1
[Identification of changes in gene loci potentially associated with cervical cancer using NotI microarrays].[使用NotI微阵列鉴定与宫颈癌潜在相关的基因座变化]
Ukr Biokhim Zh (1999). 2006 Mar-Apr;78(2):113-20.
2
Novel tumor suppressor candidates on chromosome 3 revealed by NotI-microarrays in cervical cancer.通过NotI微阵列在宫颈癌中揭示的3号染色体上的新型肿瘤抑制候选基因。
Epigenetics. 2013 Apr;8(4):409-20. doi: 10.4161/epi.24233. Epub 2013 Mar 11.
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NotI subtraction and NotI-specific microarrays to detect copy number and methylation changes in whole genomes.NotI减法和NotI特异性微阵列用于检测全基因组中的拷贝数和甲基化变化。
Proc Natl Acad Sci U S A. 2002 Aug 6;99(16):10724-9. doi: 10.1073/pnas.132271699. Epub 2002 Jul 29.
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Screening of epigenetic and genetic disturbances of human chromosome 3 genes in colorectal cancer.结直肠癌中人类3号染色体基因的表观遗传和遗传紊乱筛查
Ukr Biokhim Zh (1999). 2009 Jul-Aug;81(4):81-7.
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A NotI-EcoRV promoter library for studies of genetic and epigenetic alterations in mouse models of human malignancies.用于研究人类恶性肿瘤小鼠模型中基因和表观遗传改变的NotI-EcoRV启动子文库。
Genomics. 2004 Oct;84(4):647-60. doi: 10.1016/j.ygeno.2004.06.010.
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Alu-PCR approach to isolating NotI-linking clones from the 3p14-p21 region frequently deleted in renal cell carcinoma.运用Alu-PCR方法从肾细胞癌中经常缺失的3p14-p21区域分离NotI连接克隆。
Genomics. 1993 Jun;16(3):713-9. doi: 10.1006/geno.1993.1252.
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Chromosomal localization of seven HSA3q13-->q23 NotI linking clones on chicken microchromosomes: orthology of GGA14 and GGA15 to a gene-rich region of HSA3.7个连接人3号染色体q13至q23区域NotI片段的鸡微小染色体克隆的染色体定位:鸡14号和15号染色体与人类3号染色体富含基因区域的同源性分析
Cytogenet Genome Res. 2005;111(2):128-33. doi: 10.1159/000086381.
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NotI linking clones as a tool for joining physical and genetic maps of the human genome.NotI连接克隆作为连接人类基因组物理图谱和遗传图谱的工具。
Genomics. 1994 Jan 15;19(2):303-9. doi: 10.1006/geno.1994.1062.
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An integrated physical and gene map of the 3.5-Mb chromosome 3p21.3 (AP20) region implicated in major human epithelial malignancies.与主要人类上皮恶性肿瘤相关的3.5兆碱基3号染色体3p21.3(AP20)区域的综合物理图谱和基因图谱。
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[Technology of analysis of epigenetic and structural changes of epithelial tumors genome with NotI-microarrays by the example of human chromosome].以人类染色体为例,利用NotI微阵列分析上皮肿瘤基因组表观遗传和结构变化的技术
Mol Biol (Mosk). 2009 Mar-Apr;43(2):339-47.

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