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新种大西洋脱硫杆菌、新种太平洋脱硫杆菌和新种瓜伊马斯热弧菌,脱硫杆菌科的三个嗜热成员,细菌域内一个分支较深的谱系。

Desulfurobacterium atlanticum sp. nov., Desulfurobacterium pacificum sp. nov. and Thermovibrio guaymasensis sp. nov., three thermophilic members of the Desulfurobacteriaceae fam. nov., a deep branching lineage within the Bacteria.

作者信息

L'Haridon S, Reysenbach A-L, Tindall B J, Schönheit P, Banta A, Johnsen U, Schumann P, Gambacorta A, Stackebrandt E, Jeanthon C

机构信息

UMR 6197, Centre National de la Recherche Scientifique, IFREMER and Université de Bretagne Occidentale, IFREMER Centre de Brest, BP 70, 29280 Plouzané, France.

Portland State University, Department of Biology, Portland, OR 97201, USA.

出版信息

Int J Syst Evol Microbiol. 2006 Dec;56(Pt 12):2843-2852. doi: 10.1099/ijs.0.63994-0.

Abstract

Three thermophilic, anaerobic, strictly chemolithoautotrophic, sulphur- and/or thiosulphate-reducing bacteria, designated SL17(T), SL19(T) and SL22(T), were isolated from deep-sea hydrothermal samples collected at 13 degrees N (East Pacific Rise), Guaymas Basin (Gulf of California) and 23 degrees N (Mid-Atlantic Ridge), respectively. These strains differed in their morphology, temperature range and optimum for growth, energy substrates and 16S rRNA gene sequences. The G+C content of the genomic DNA was 41 mol% (SL22(T)), 42 mol% (SL17(T)) and 46 mol% (SL19(T)). Comparative analysis of phenotypic and phylogenetic traits indicated that strains SL17(T) and SL22(T) represented two novel species of the genus Desulfurobacterium and that strain SL19(T) should be considered as a novel species of the genus Thermovibrio. The names Desulfurobacterium pacificum sp. nov. (type strain SL17(T)=DSM 15522(T)=JCM 12127(T)), Desulfurobacterium atlanticum sp. nov. (type strain SL22(T)=DSM 15668(T)=JCM 12129(T)) and Thermovibrio guaymasensis sp. nov. (type strain SL19(T)=DSM 15521(T)=JCM 12128(T)) are proposed for these organisms. Furthermore, phylogenetic data based on 16S rRNA gene sequence analyses correlated with the significant phenotypic differences between members of the lineage encompassing the genera Desulfurobacterium, Thermovibrio and Balnearium and that of the families Aquificaceae and Hydrogenothermaceae. It is therefore proposed that this lineage represents a new family, Desulfurobacteriaceae fam. nov., within the order Aquificales.

摘要

从分别采自北纬13度(东太平洋海隆)、瓜伊马斯盆地(加利福尼亚湾)和北纬23度(中大西洋海脊)的深海热液样本中分离出三株嗜热、厌氧、严格化能自养、能还原硫和/或硫代硫酸盐的细菌,分别命名为SL17(T)、SL19(T)和SL22(T)。这些菌株在形态、生长温度范围和最适温度、能量底物以及16S rRNA基因序列方面存在差异。基因组DNA的G+C含量分别为41 mol%(SL22(T))、42 mol%(SL17(T))和46 mol%(SL19(T))。对表型和系统发育特征的比较分析表明,菌株SL17(T)和SL22(T)代表脱硫杆菌属的两个新物种,菌株SL19(T)应被视为热弧菌属的一个新物种。提出将太平洋脱硫杆菌新种(模式菌株SL17(T)=DSM 15522(T)=JCM 12127(T))、大西洋脱硫杆菌新种(模式菌株SL22(T)=DSM 15668(T)=JCM 12129(T))和瓜伊马斯热弧菌新种(模式菌株SL19(T)=DSM 15521(T)=JCM 12128(T))用于这些微生物。此外,基于16S rRNA基因序列分析的系统发育数据与包含脱硫杆菌属、热弧菌属和温泉杆菌属的谱系成员与水生栖热菌科和氢嗜热菌科成员之间的显著表型差异相关。因此,建议将这个谱系在水生栖热菌目中代表一个新科,即脱硫杆菌科新科。

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