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从真菌棒束孢中分离出的两种具有多个修饰氨基酸残基的新型环六肽。

Two novel hexadepsipeptides with several modified amino acid residues isolated from the fungus Isaria.

作者信息

Ravindra Gudihal, Ranganayaki Rappal S, Raghothama Srinivasa, Srinivasan Mandayam C, Gilardi Richard D, Karle Isabella L, Balaram Padmanabhan

机构信息

Molecular Biophysics Unit, Indian Institute of Science, Bangalore-560012, India.

出版信息

Chem Biodivers. 2004 Mar;1(3):489-504. doi: 10.1002/cbdv.200490043.

Abstract

Two new cyclohexadepsipeptides have been isolated from the fungus Isaria. Fungal growth in solid media yielded hyphal strands from which peptide fractions were readily isolable by organic-solvent extraction. Two novel cyclodepsipeptides, isaridin A and isaridin B, have been isolated by reverse-phase HPLC, and characterized by ESI-MS and 1H-NMR. Single crystals of both peptides have been obtained, and their 3D structures were elucidated by X-ray diffraction. The isaridins contain several unusual amino acid residues. The sequences are cyclo(beta-Gly-HyLeu-Pro-Phe-NMeVal-NMePhe) and cyclo(beta-Gly-HyLeu-beta-MePro-Phe-NMeVal-NMePhe), where NMeVal is N-methylvaline, NMePhe N-methylphenylalanine, and HyLeu hydroxyleucine (= 2-hydroxy-4-methylpentanoic acid). The two peptides differ from one another at residue 3, isaridin A having an (S)-proline at this position, while beta-methyl-(S)-proline (= (2S,3S)-2,3,4,5-tetrahydro-3-methyl-1H-pyrrole-2-carboxylic acid) is found in isaridin B. The solid-state conformations of both cyclic depsipeptides are characterized by the presence of two cis peptide bonds at HyLeu(2)-Pro(3)/HyLeu(2)-beta-MePro(3) and NMeVal(5)-NMePhe(6), respectively. In isaridin A, a strong intramolecular H-bond is observed between Phe(4)CO...HNbeta-Gly(1), and a similar, but weaker, interaction is observed between beta-Gly(1)CO...HNPhe(4). In contrast, in isaridin B, only a single intramolecular H-bond is observed between beta-Gly(1)CO...HNPhe(4).

摘要

从真菌棒束孢中分离出了两种新的环缩肽。在固体培养基中真菌生长产生了菌丝束,通过有机溶剂萃取可轻松从其中分离出肽级分。通过反相高效液相色谱法分离出了两种新型环缩肽,异棒束孢菌素A和异棒束孢菌素B,并通过电喷雾电离质谱法和1H-核磁共振进行了表征。已获得这两种肽的单晶,并通过X射线衍射阐明了它们的三维结构。异棒束孢菌素含有几个不寻常的氨基酸残基。其序列分别为环(β-甘氨酸-羟基亮氨酸-脯氨酸-苯丙氨酸-N-甲基缬氨酸-N-甲基苯丙氨酸)和环(β-甘氨酸-羟基亮氨酸-β-甲基脯氨酸-苯丙氨酸-N-甲基缬氨酸-N-甲基苯丙氨酸),其中N-甲基缬氨酸是N-甲基缬氨酸,N-甲基苯丙氨酸是N-甲基苯丙氨酸,羟基亮氨酸是羟亮氨酸(= 2-羟基-4-甲基戊酸)。这两种肽在第3位残基处有所不同,异棒束孢菌素A在该位置具有(S)-脯氨酸,而异棒束孢菌素B中则发现β-甲基-(S)-脯氨酸(=(2S,3S)-2,3,4,5-四氢-3-甲基-1H-吡咯-2-羧酸)。两种环缩肽的固态构象分别以在羟亮氨酸(2)-脯氨酸(3)/羟亮氨酸(2)-β-甲基脯氨酸(3)和N-甲基缬氨酸(5)-N-甲基苯丙氨酸(6)处存在两个顺式肽键为特征。在异棒束孢菌素A中,观察到苯丙氨酸(4)羰基...HNβ-甘氨酸(1)之间有一个强分子内氢键,并且在β-甘氨酸(1)羰基...HNPhe(4)之间观察到类似但较弱的相互作用。相比之下,在异棒束孢菌素B中,仅在β-甘氨酸(1)羰基...HNPhe(4)之间观察到一个单一的分子内氢键。

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