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一个不可逆且受动力学控制的过程:嗜热栖热放线菌中L-2-羟基异己酸脱氢酶的热诱导变性

An irreversible and kinetically controlled process: thermal induced denaturation of L-2-hydroxyisocaproate dehydrogenase from Lactobacillus confusus.

作者信息

Bao Lide, Chatterjee Shivani, Lohmer Sabine, Schomburg Dietmar

机构信息

Institute for Biochemistry, University of Cologne, Zuelpicher Strasse 47, 50674 Cologne, Germany.

出版信息

Protein J. 2007 Apr;26(3):143-51. doi: 10.1007/s10930-006-9055-y.

Abstract

The thermal denaturation of Lactobacillus confusus L-2-Hydroxyisocaproate Dehydrogenase (L-HicDH) has been studied by Differential Scanning Calorimetry (DSC). The stability of this enzyme has been investigated at different pH conditions. The results of this study indicate that the thermal denaturation of this enzyme is irreversible and the T(m) is dependent on the scan-rate, which suggests that the denaturation process of L-HicDH is kinetically determined. The heat capacity function of L-HicDH shows a single peak with the T(m) values between 52.14 degrees C and 55.89 degrees C at pH 7.0 at different scan rates. These results indicate that the whole L-HicDH could unfold as a single cooperative unit, and intersubunit interactions of this homotetrameric enzyme must play a significant role in the stabilization of the whole enzyme. The rate constant of the unfolding is analyzed as a first order kinetic constant with the Arrhenius equation, and the activation energy has been calculated. The variation of the activation energy values obtained with different methods does not support the validity of the one-step irreversible model. The denaturation pathway was described by a three-state model, N --> U --> F, in which the dissociation of the tetramer takes place as an irreversible step before the irreversible unfolding of the monomers. The calorimetric enthalpy associated with the irreversible dissociation and the calorimetric enthalpy associated with the unfolding of the monomer were obtained from the best fitting procedure. Thermal unfolding of L-HicDH was also studied using Circular Dichroism (CD) spectroscopy. Both methods yielded comparable values.

摘要

通过差示扫描量热法(DSC)研究了混淆乳杆菌L-2-羟基异己酸脱氢酶(L-HicDH)的热变性。在不同pH条件下研究了该酶的稳定性。本研究结果表明,该酶的热变性是不可逆的,且熔点(T(m))取决于扫描速率,这表明L-HicDH的变性过程由动力学决定。在pH 7.0、不同扫描速率下,L-HicDH的热容函数显示出一个单峰,T(m)值在52.14℃至55.89℃之间。这些结果表明,整个L-HicDH可以作为一个单一的协同单元展开,这种同四聚体酶的亚基间相互作用必定在整个酶的稳定性中发挥重要作用。用阿伦尼乌斯方程将展开的速率常数分析为一级动力学常数,并计算了活化能。用不同方法得到的活化能值的变化不支持一步不可逆模型的有效性。变性途径用三态模型N→U→F描述,其中四聚体的解离在单体不可逆展开之前作为一个不可逆步骤发生。从最佳拟合程序中获得与不可逆解离相关的量热焓和与单体展开相关的量热焓。还使用圆二色性(CD)光谱研究了L-HicDH的热展开。两种方法得到了可比的值。

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