Xavier Joao B, Foster Kevin R
Center for Systems Biology, Harvard University, Bauer Laboratory, 7 Divinity Avenue, Cambridge, MA 02138, USA.
Proc Natl Acad Sci U S A. 2007 Jan 16;104(3):876-81. doi: 10.1073/pnas.0607651104. Epub 2007 Jan 8.
Biofilms, in which cells attach to surfaces and secrete slime (polymeric substances), are central to microbial life. Biofilms are often thought to require high levels of cooperation because extracellular polymeric substances are a shared resource produced by one cell that can be used by others. Here we examine this hypothesis by using a detailed individual-based simulation of a biofilm to investigate the outcome of evolutionary competitions between strains that differ in their level of polymer production. Our model includes a biochemical description of the carbon fluxes for growth and polymer production, and it explicitly calculates diffusion-reaction effects and the resulting solute gradients in the biofilm. An emergent property of these simple but realistic mechanistic assumptions is a strong evolutionary advantage to extracellular polymer production. Polymer secretion is altruistic to cells above a focal cell: it pushes later generations in their lineage up and out into better oxygen conditions, but it harms others; polymer production suffocates neighboring nonpolymer producers. This property, analogous to vertical growth in plants, suggests that polymer secretion provides a strong competitive advantage to cell lineages within mixed-genotype biofilms: global cooperation is not required. Our model fundamentally changes how biofilms are expected to respond to changing social conditions; the presence of multiple strains in a biofilm should promote rather than inhibit polymer secretion.
生物膜是微生物生命的核心,其中细胞附着于表面并分泌黏液(聚合物质)。生物膜通常被认为需要高度的合作,因为胞外聚合物是一种由一个细胞产生的可被其他细胞利用的共享资源。在这里,我们通过使用一个详细的基于个体的生物膜模拟来检验这一假设,以研究聚合物产生水平不同的菌株之间进化竞争的结果。我们的模型包括生长和聚合物产生的碳通量的生化描述,并明确计算生物膜中的扩散-反应效应以及由此产生的溶质梯度。这些简单但现实的机制假设的一个突出特性是胞外聚合物产生具有强大的进化优势。聚合物分泌对焦点细胞上方的细胞是利他的:它将其谱系中的后代向上推并推向更好的氧气条件,但对其他细胞有害;聚合物产生会使邻近的非聚合物生产者窒息。这种类似于植物垂直生长的特性表明,聚合物分泌为混合基因型生物膜内的细胞谱系提供了强大的竞争优势:不需要全球合作。我们的模型从根本上改变了人们对生物膜如何应对不断变化的社会条件的预期;生物膜中多种菌株的存在应该促进而不是抑制聚合物分泌。