Carmon Amber, Wilkin Marian, Hassan Jana, Baron Martin, MacIntyre Ross
Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA.
Genetics. 2007 May;176(1):309-25. doi: 10.1534/genetics.106.060897. Epub 2007 Jan 21.
We have determined by reverse Southern analysis and direct sequence comparisons that most of the dumpy gene has evolved in the dipteran and other insect orders by purifying selection acting on amino acid replacements. One region, however, is evolving rapidly due to unequal crossing over and/or gene conversion. This region, called "PIGSFEAST," or PF, encodes in D. melanogaster 30-47 repeats of 102 amino acids rich in serines, threonines, and prolines. We show that the processes of concerted evolution have been operating on all species of Drosophila examined to date, but that an adjacent region has expanded in Anopheles gambiae, Aedes aegypti, and Tribolium castaneum, while the PF repeats are reduced in size and number. In addition, processes of concerted evolution have radically altered the codon usage patterns in D. melanogaster, D. pseudoobscura, and D. virilis compared with the rest of the dumpy gene. We show also that the dumpy gene is expressed on the inner surface of the micropyle of the mature oocyte and propose that, as in the abalone system, concerted evolution may be involved in adaptive changes affecting Dumpy's possible role in sperm-egg recognition.
我们通过反向Southern分析和直接序列比较确定,大部分短粗基因在双翅目和其他昆虫目中是通过对氨基酸替换进行纯化选择而进化的。然而,有一个区域由于不等交换和/或基因转换而快速进化。这个区域称为“PIGSFEAST”,或PF,在黑腹果蝇中编码30 - 47个富含丝氨酸、苏氨酸和脯氨酸的102个氨基酸的重复序列。我们表明,协同进化过程在迄今为止所检测的所有果蝇物种中都在起作用,但在冈比亚按蚊、埃及伊蚊和赤拟谷盗中,一个相邻区域已经扩大,而PF重复序列的大小和数量减少。此外,与短粗基因的其余部分相比,协同进化过程已经从根本上改变了黑腹果蝇、拟暗果蝇和粗壮果蝇的密码子使用模式。我们还表明,短粗基因在成熟卵母细胞的卵孔内表面表达,并提出,如同在鲍鱼系统中一样,协同进化可能参与了影响短粗基因在精卵识别中可能作用的适应性变化。