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随机漂变在渐变群中的数值分析。

Numerical analysis of random drift in a cline.

机构信息

Dept. of Biophysics and Theoretical Biology, The University of Chicago, Chicago, Illinois 60637.

出版信息

Genetics. 1980 Feb;94(2):497-517. doi: 10.1093/genetics/94.2.497.

Abstract

The equilibrium state of a diffusion model for random genetic drift in a cline is analyzed numerically. The monoecious organism occupies an unbounded linear habitat with constant, uniform population density. Migration is homogeneous, symmetric and independent of genotype. A single diallelic locus with a step environment is investigated in the absence of dominance and mutation. The flattening of the expected cline due to random drift is very slight in natural populations. The ratio of the variance of either gene frequency to the product of the expected gene frequencies decreases monotonically to a nonzero constant. The correlation between the gene frequencies at two points decreases monotonically to zero as the separation is increased with the average position fixed; the decrease is asymptotically exponential. The correlation decreases monotonically to a positive constant depending on the separation as the average position increasingly deviates from the center of the cline with the separation fixed. The correlation also decreases monotonically to zero if one of the points is fixed and the other is moved outward in the habitat, the ultimate decrease again being exponential. Some asymptotic formulae are derived analytically.--The loss of an allele favored in an environmental pocket is investigated by simulating a chain of demes exchanging migrants, the other assumptions being the same as above. For most natural populations, provided the allele would be maintained in the population deterministically, this process is too slow to have evolutionary importance.

摘要

对一个渐变群中随机遗传漂变的扩散模型的平衡态进行了数值分析。雌雄同体的生物占据一个具有恒定、均匀种群密度的无限线性栖息地。迁移是同质的、对称的,且与基因型无关。在不存在显性和突变的情况下,研究了一个具有阶跃环境的单等位基因座。由于随机漂变,预期渐变群的变平程度在自然种群中非常小。任一基因频率的方差与预期基因频率乘积的比值单调减小到非零常数。随着分离度的增加,两个点之间的基因频率相关性单调减小到零,而平均位置固定;这种减少是渐近指数的。随着平均位置越来越偏离渐变群的中心,相关性单调减小到取决于分离度的正常数,而分离度固定。如果一个点固定,另一个点在栖息地向外移动,相关性也会单调减小到零,最终的减小再次是指数的。通过模拟一个交换移民的群体链,推导出了一些解析的渐近公式。——通过模拟一个交换移民的群体链,研究了在环境小口袋中有利等位基因的丢失情况,其他假设与上述相同。对于大多数自然种群来说,如果该等位基因在种群中是确定性维持的,那么这个过程太慢,没有进化意义。

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本文引用的文献

1
Numerical analysis of weak random drift in a cline.
Genetics. 1979 May;92(1):297-303. doi: 10.1093/genetics/92.1.297.
3
Conditions for the existence of clines.
Genetics. 1975 Jul;80(3):595-615. doi: 10.1093/genetics/80.3.595.
4
Persistence of common alleles in two related populations or species.
Genetics. 1977 Aug;86(4):901-14. doi: 10.1093/genetics/86.4.901.

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