Bush Matthew F, O'Brien Jeremy T, Prell James S, Saykally Richard J, Williams Evan R
Department of Chemistry, University of California, Berkeley, California 94720-1460, USA.
J Am Chem Soc. 2007 Feb 14;129(6):1612-22. doi: 10.1021/ja066335j. Epub 2007 Jan 24.
The gas-phase structures of protonated and alkali metal cationized arginine (Arg) and arginine methyl ester (ArgOMe) are investigated with infrared spectroscopy and ab initio calculations. Infrared spectra, measured in the hydrogen-stretch region, provide compelling evidence that arginine changes from its nonzwitterionic to zwitterionic form with increasing metal ion size, with the transition in structure occurring between lithium and sodium. For sodiated arginine, evidence for both forms is obtained from spectral deconvolution, although the zwitterionic form is predominant. Comparisons of the photodissociation spectra with spectra calculated for low-energy candidate structures provide additional insights into the detailed structures of these ions. ArgLi+, ArgOMeLi+, and ArgOMeNa+ exist in nonzwitterionic forms in which the metal ion is tricoordinated with the amino acid, whereas ArgNa+ and ArgK+ predominately exist in a zwitterionic form where the protonated side chain donates one hydrogen bond to the N terminus of the amino acid and the metal ion is bicoordinated with the carboxylate group. ArgH+ and ArgOMe*H+ have protonated side chains that form the same interaction with the N terminus as zwitterionic, alkali metal cationized arginine, yet both are unambiguously determined to be nonzwitterionic. Calculations indicate that for clusters with protonated side chains, structures with two strong hydrogen bonds are lowest in energy, in disagreement with these experimental results. This study provides new detailed structural assignments and interpretations of previously observed fragmentation patterns for these ions.
利用红外光谱和从头算计算研究了质子化和碱金属阳离子化的精氨酸(Arg)及精氨酸甲酯(ArgOMe)的气相结构。在氢拉伸区域测量的红外光谱提供了令人信服的证据,表明随着金属离子尺寸的增加,精氨酸从非两性离子形式转变为两性离子形式,结构转变发生在锂和钠之间。对于钠化精氨酸,虽然两性离子形式占主导,但通过光谱去卷积获得了两种形式的证据。将光解离光谱与为低能候选结构计算的光谱进行比较,为这些离子的详细结构提供了更多见解。ArgLi⁺、ArgOMeLi⁺和ArgOMeNa⁺以非两性离子形式存在,其中金属离子与氨基酸形成三配位,而ArgNa⁺和ArgK⁺主要以两性离子形式存在,其中质子化的侧链向氨基酸的N端提供一个氢键,金属离子与羧酸根基团形成双配位。ArgH⁺和ArgOMe*H⁺具有质子化的侧链,它们与N端形成与两性离子、碱金属阳离子化精氨酸相同的相互作用,但两者都明确被确定为非两性离子。计算表明,对于具有质子化侧链的簇,具有两个强氢键的结构能量最低,这与这些实验结果不一致。本研究为这些离子先前观察到的碎片化模式提供了新的详细结构归属和解释。