Suppr超能文献

气相中阳离子化精氨酸的红外光谱:从非两性离子结构转变为两性离子结构的直接证据。

Infrared spectroscopy of cationized arginine in the gas phase: direct evidence for the transition from nonzwitterionic to zwitterionic structure.

作者信息

Bush Matthew F, O'Brien Jeremy T, Prell James S, Saykally Richard J, Williams Evan R

机构信息

Department of Chemistry, University of California, Berkeley, California 94720-1460, USA.

出版信息

J Am Chem Soc. 2007 Feb 14;129(6):1612-22. doi: 10.1021/ja066335j. Epub 2007 Jan 24.

Abstract

The gas-phase structures of protonated and alkali metal cationized arginine (Arg) and arginine methyl ester (ArgOMe) are investigated with infrared spectroscopy and ab initio calculations. Infrared spectra, measured in the hydrogen-stretch region, provide compelling evidence that arginine changes from its nonzwitterionic to zwitterionic form with increasing metal ion size, with the transition in structure occurring between lithium and sodium. For sodiated arginine, evidence for both forms is obtained from spectral deconvolution, although the zwitterionic form is predominant. Comparisons of the photodissociation spectra with spectra calculated for low-energy candidate structures provide additional insights into the detailed structures of these ions. ArgLi+, ArgOMeLi+, and ArgOMeNa+ exist in nonzwitterionic forms in which the metal ion is tricoordinated with the amino acid, whereas ArgNa+ and ArgK+ predominately exist in a zwitterionic form where the protonated side chain donates one hydrogen bond to the N terminus of the amino acid and the metal ion is bicoordinated with the carboxylate group. ArgH+ and ArgOMe*H+ have protonated side chains that form the same interaction with the N terminus as zwitterionic, alkali metal cationized arginine, yet both are unambiguously determined to be nonzwitterionic. Calculations indicate that for clusters with protonated side chains, structures with two strong hydrogen bonds are lowest in energy, in disagreement with these experimental results. This study provides new detailed structural assignments and interpretations of previously observed fragmentation patterns for these ions.

摘要

利用红外光谱和从头算计算研究了质子化和碱金属阳离子化的精氨酸(Arg)及精氨酸甲酯(ArgOMe)的气相结构。在氢拉伸区域测量的红外光谱提供了令人信服的证据,表明随着金属离子尺寸的增加,精氨酸从非两性离子形式转变为两性离子形式,结构转变发生在锂和钠之间。对于钠化精氨酸,虽然两性离子形式占主导,但通过光谱去卷积获得了两种形式的证据。将光解离光谱与为低能候选结构计算的光谱进行比较,为这些离子的详细结构提供了更多见解。ArgLi⁺、ArgOMeLi⁺和ArgOMeNa⁺以非两性离子形式存在,其中金属离子与氨基酸形成三配位,而ArgNa⁺和ArgK⁺主要以两性离子形式存在,其中质子化的侧链向氨基酸的N端提供一个氢键,金属离子与羧酸根基团形成双配位。ArgH⁺和ArgOMe*H⁺具有质子化的侧链,它们与N端形成与两性离子、碱金属阳离子化精氨酸相同的相互作用,但两者都明确被确定为非两性离子。计算表明,对于具有质子化侧链的簇,具有两个强氢键的结构能量最低,这与这些实验结果不一致。本研究为这些离子先前观察到的碎片化模式提供了新的详细结构归属和解释。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f05c/2675882/9eee025d49b1/nihms69593f1.jpg

相似文献

5
One water molecule stabilizes the cationized arginine zwitterion.一个水分子使阳离子化精氨酸两性离子稳定。
J Am Chem Soc. 2007 Nov 7;129(44):13544-53. doi: 10.1021/ja073796b. Epub 2007 Oct 11.

引用本文的文献

4
Computed Vibrational Heat Capacities for Gas-Phase Biomolecular Ions.气相生物分子离子的计算振动热容
J Am Soc Mass Spectrom. 2025 Apr 2;36(4):862-872. doi: 10.1021/jasms.5c00008. Epub 2025 Mar 6.

本文引用的文献

6
IRMPD spectroscopy of metal-ion/tryptophan complexes.金属离子/色氨酸配合物的红外多光子解离光谱
Phys Chem Chem Phys. 2006 Jun 21;8(23):2744-51. doi: 10.1039/b603665a. Epub 2006 May 16.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验