De Gelder Leen, Ponciano José M, Joyce Paul, Top Eva M
Department of Biological Sciences (PO Box 443051), 252 Life Sciences South, University of Idaho, Moscow, ID 83844-3051, USA.
Department of Mathematics (PO Box 441103), University of Idaho, Moscow, ID 83844-1103, USA.
Microbiology (Reading). 2007 Feb;153(Pt 2):452-463. doi: 10.1099/mic.0.2006/001784-0.
Broad-host-range (BHR) IncP-1 plasmids have the ability to transfer between and replicate in nearly all species of the Alpha-, Beta- and Gammaproteobacteria, but surprisingly few data are available on the stability of these plasmids in strains within their host range. Moreover, even though molecular interactions between the bacterial host and its plasmid(s) exist, no systematic study to date has compared the stability of the same plasmid among different hosts. The goal of this study was to examine whether the stability characteristics of an IncP-1 plasmid can be variable between strains within the host range of the plasmid. Therefore, 19 strains within the Alpha-, Beta- or Gammaproteobacteria carrying the IncP-1beta plasmid pB10 were serially propagated in non-selective medium and the fraction of segregants was monitored through replica-picking. Remarkably, a large variation in the stability of pB10 in different strains was found, even between strains within the same genus or species. Ten strains showed no detectable plasmid loss over about 200 generations, and in two strains plasmid-free clones were only sporadically observed. In contrast, three strains, Pseudomonas koreensis R28, Pseudomonas putida H2 and Stenotrophomonas maltophilia P21, exhibited rapid plasmid loss within 80 generations. Parameter estimation after mathematical modelling of these stability data suggested high frequencies of segregation (about 0.04 per generation) or high plasmid cost (i.e. a relative fitness decrease in plasmid-bearing cells of about 15 and 40 %), which was confirmed experimentally. The models also suggested that plasmid reuptake by conjugation only played a significant role in plasmid stability in one of the three strains. Four of the 19 strains lost the plasmid very slowly over about 600 generations. The erratic decrease of the plasmid-containing fraction and simulation of the data with a new mathematical model suggested that plasmid cost was variable over time due to compensatory mutations. The findings of this study demonstrate that the ability of a so-called 'BHR' plasmid to persist in a bacterial population is influenced by strain-specific traits, and therefore observations made for one strain should not be generalized for the entire species or genus.
广宿主范围(BHR)IncP-1质粒能够在几乎所有的α-、β-和γ-变形菌属物种之间转移并在其中复制,但令人惊讶的是,关于这些质粒在其宿主范围内菌株中的稳定性的数据却很少。此外,尽管细菌宿主与其质粒之间存在分子相互作用,但迄今为止尚无系统研究比较同一质粒在不同宿主中的稳定性。本研究的目的是检验IncP-1质粒的稳定性特征在质粒宿主范围内的菌株之间是否可变。因此,携带IncP-1β质粒pB10的19株α-、β-或γ-变形菌在非选择性培养基中连续传代,并通过影印接种监测分离菌的比例。值得注意的是,发现pB10在不同菌株中的稳定性存在很大差异,即使在同一属或同一物种的菌株之间也是如此。10株菌株在约200代中未检测到质粒丢失,并且在两株菌株中仅偶尔观察到无质粒克隆。相比之下,三株菌株,即韩国假单胞菌R28、恶臭假单胞菌H2和嗜麦芽窄食单胞菌P21,在80代内表现出快速的质粒丢失。对这些稳定性数据进行数学建模后的参数估计表明分离频率较高(约每代0.04)或质粒代价较高(即携带质粒的细胞相对适合度降低约15%和40%),这一点得到了实验证实。模型还表明,通过接合进行的质粒重新摄取仅在三株菌株中的一株的质粒稳定性中起重要作用。19株菌株中有4株在约600代中非常缓慢地丢失了质粒。含质粒部分的不稳定下降以及用新的数学模型对数据进行模拟表明,由于补偿性突变,质粒代价随时间而变化。本研究结果表明,所谓“广宿主范围”质粒在细菌群体中持续存在的能力受菌株特异性特征的影响,因此对一个菌株的观察结果不应推广到整个物种或属。