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加载环:枯草芽孢杆菌DnaB蛋白的结构,复制解旋酶的共加载因子

Loading a ring: structure of the Bacillus subtilis DnaB protein, a co-loader of the replicative helicase.

作者信息

Núñez-Ramírez Rafael, Velten Marion, Rivas Germán, Polard Patrice, Carazo José María, Donate Luis Enrique

机构信息

Departmento de Estructura de Macromoléculas, Centro Nacional de Biotecnología, CSIC, Campus Universidad Autónoma de Madrid, 28049 Madrid, Spain.

出版信息

J Mol Biol. 2007 Mar 30;367(3):764-9. doi: 10.1016/j.jmb.2006.12.075. Epub 2007 Jan 9.

Abstract

Loading of the ring-shaped replicative helicase is a critical step in the initiation of DNA replication. Bacillus subtilis has adopted a two-protein strategy to load its hexameric replicative helicase: DnaB and DnaI interact with the helicase and mediate its delivery onto DNA. We present here the 3D electron microscopy structure of the DnaB protein, along with a detailed analysis of both its oligomeric state and its domain organization. DnaB is organized as an asymmetric tetramer that is comprised of two stacked components, one arranged as a closed collar and the other as an open sigma shape. Intriguingly, the 3D map of DnaB exhibits an overall architecture similar to the structure of the Escherichia coli gamma-complex, the loader of the ring-shaped processivity factor. We propose a model whereby each DnaB monomer participates in both stacked components of the tetramer and displays a different overall shape. This asymmetric quaternary organization could be a general feature of ring loaders.

摘要

环状复制解旋酶的装载是DNA复制起始过程中的关键步骤。枯草芽孢杆菌采用双蛋白策略来装载其六聚体复制解旋酶:DnaB和DnaI与解旋酶相互作用,并介导其递送至DNA上。我们在此展示了DnaB蛋白的三维电子显微镜结构,并对其寡聚状态和结构域组织进行了详细分析。DnaB组装成一个不对称四聚体,由两个堆叠的组件组成,一个排列成封闭的环,另一个呈开放的西格玛形状。有趣的是,DnaB的三维图谱显示出与大肠杆菌γ复合物(环状持续合成因子的装载蛋白)结构相似的整体结构。我们提出了一个模型,其中每个DnaB单体都参与四聚体的两个堆叠组件,并呈现出不同的整体形状。这种不对称的四级结构可能是环装载蛋白的一个普遍特征。

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