Suppr超能文献

细菌中 DNA 复制起始时解旋酶加载的多种机制。

Diverse Mechanisms of Helicase Loading during DNA Replication Initiation in Bacteria.

机构信息

Department of Molecular Microbiology, Washington University School of Medicine, Saint Louis, Missouri, USA.

Center for Women's Infectious Disease Research, Washington University School of Medicine, Saint Louis, Missouri, USA.

出版信息

J Bacteriol. 2023 Apr 25;205(4):e0048722. doi: 10.1128/jb.00487-22. Epub 2023 Mar 6.

Abstract

Initiation of DNA replication is required for cell viability and passage of genetic information to the next generation. Studies in Escherichia coli and Bacillus subtilis have established TPases ssociated with diverse cellular ctivities (AAA+) as essential proteins required for loading of the replicative helicase at replication origins. AAA+ ATPases DnaC in E. coli and DnaI in B. subtilis have long been considered the paradigm for helicase loading during replication in bacteria. Recently, it has become increasingly clear that most bacteria lack DnaC/DnaI homologs. Instead, most bacteria express a protein homologous to the newly described DciA ( ntecedent) protein. DciA is not an ATPase, and yet it serves as a helicase operator, providing a function analogous to that of DnaC and DnaI across diverse bacterial species. The recent discovery of DciA and of other alternative mechanisms of helicase loading in bacteria has changed our understanding of DNA replication initiation. In this review, we highlight recent discoveries, detailing what is currently known about the replicative helicase loading process across bacterial species, and we discuss the critical questions that remain to be investigated.

摘要

DNA 复制的起始是细胞存活和遗传信息传递到下一代所必需的。在大肠杆菌和枯草芽孢杆菌中的研究已经确定了与多种细胞活动相关的 TPases ssociated with diverse cellular ctivities(AAA+)是复制起始处复制解旋酶加载所必需的必需蛋白。大肠杆菌中的 DnaC 和枯草芽孢杆菌中的 DnaI 一直被认为是细菌复制过程中解旋酶加载的典范。最近,越来越明显的是,大多数细菌缺乏 DnaC/DnaI 同源物。相反,大多数细菌表达一种与新描述的 DciA(antecedent)蛋白同源的蛋白质。DciA 不是 ATP 酶,但它作为解旋酶的操作子,提供了与 DnaC 和 DnaI 在不同细菌物种中类似的功能。最近发现 DciA 以及细菌中其他替代的解旋酶加载机制改变了我们对 DNA 复制起始的理解。在这篇综述中,我们强调了最近的发现,详细介绍了目前在不同细菌物种中复制解旋酶加载过程的已知情况,并讨论了仍需研究的关键问题。

相似文献

1
Diverse Mechanisms of Helicase Loading during DNA Replication Initiation in Bacteria.
J Bacteriol. 2023 Apr 25;205(4):e0048722. doi: 10.1128/jb.00487-22. Epub 2023 Mar 6.
2
DciA Helicase Operators Exhibit Diversity across Bacterial Phyla.
J Bacteriol. 2022 Aug 16;204(8):e0016322. doi: 10.1128/jb.00163-22. Epub 2022 Jul 26.
4
A two-protein strategy for the functional loading of a cellular replicative DNA helicase.
Mol Cell. 2003 Apr;11(4):1009-20. doi: 10.1016/s1097-2765(03)00130-8.
5
DnaB, DnaD and DnaI proteins are components of the Bacillus subtilis replication restart primosome.
Mol Microbiol. 2001 Oct;42(1):245-55. doi: 10.1046/j.1365-2958.2001.02631.x.
6
Helicase binding to DnaI exposes a cryptic DNA-binding site during helicase loading in Bacillus subtilis.
Nucleic Acids Res. 2006;34(18):5247-58. doi: 10.1093/nar/gkl690. Epub 2006 Sep 26.
9
Domestication of Lambda Phage Genes into a Putative Third Type of Replicative Helicase Matchmaker.
Genome Biol Evol. 2017 Jun 1;9(6):1561-1566. doi: 10.1093/gbe/evx111.
10
Structural Insights of the DciA Helicase Loader in Its Relationship with DNA.
Int J Mol Sci. 2023 Jan 11;24(2):1427. doi: 10.3390/ijms24021427.

引用本文的文献

1
DNA replication initiation timing is important for maintaining genome integrity.
J Bacteriol. 2025 Jul 21:e0017525. doi: 10.1128/jb.00175-25.
2
DnaB and DciA: mechanisms of helicase loading and translocation on ssDNA.
Nucleic Acids Res. 2025 Jun 20;53(12). doi: 10.1093/nar/gkaf521.
3
Escherichia coli DNA replication: the old model organism still holds many surprises.
FEMS Microbiol Rev. 2024 Jun 20;48(4). doi: 10.1093/femsre/fuae018.
4
DNA replication initiation timing is important for maintaining genome integrity.
bioRxiv. 2024 Jun 18:2024.06.18.599555. doi: 10.1101/2024.06.18.599555.
5
Frequent nonhomologous replacement of replicative helicase loaders by viruses in .
Proc Natl Acad Sci U S A. 2024 May 7;121(19):e2317954121. doi: 10.1073/pnas.2317954121. Epub 2024 Apr 29.

本文引用的文献

2
InterPro in 2022.
Nucleic Acids Res. 2023 Jan 6;51(D1):D418-D427. doi: 10.1093/nar/gkac993.
3
DciA Helicase Operators Exhibit Diversity across Bacterial Phyla.
J Bacteriol. 2022 Aug 16;204(8):e0016322. doi: 10.1128/jb.00163-22. Epub 2022 Jul 26.
5
Convergent evolution in two bacterial replicative helicase loaders.
Trends Biochem Sci. 2022 Jul;47(7):620-630. doi: 10.1016/j.tibs.2022.02.005. Epub 2022 Mar 26.
6
Structural insight into replicative helicase loading in Escherichia coli.
J Biochem. 2022 May 27;171(6):605-607. doi: 10.1093/jb/mvac023.
8
Mechanisms of hexameric helicases.
Crit Rev Biochem Mol Biol. 2021 Dec;56(6):621-639. doi: 10.1080/10409238.2021.1954597. Epub 2021 Aug 17.
9
Highly accurate protein structure prediction with AlphaFold.
Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15.
10
DnaB helicase dynamics in bacterial DNA replication resolved by single-molecule studies.
Nucleic Acids Res. 2021 Jul 9;49(12):6804-6816. doi: 10.1093/nar/gkab493.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验