Iché-Tarrat Nathalie, Ruiz-Lopez Manuel, Barthelat Jean-Claude, Vigroux Alain
Laboratoire de Synthèse et Physico-Chimie de Molécules d'Intérêt Biologique, UMR 5068 CNRS, Université Paul Sabatier, 31062 Toulouse Cedex 9, France.
Chemistry. 2007;13(13):3617-29. doi: 10.1002/chem.200601458.
Quantum chemistry methods coupled with a continuum solvation model have been applied to evaluate the substrate-assisted catalysis (SAC) mechanism recently proposed for the hydrolysis of phosphate monoester dianions. The SAC mechanism, in which a proton from the nucleophile is transferred to a nonbridging phosphoryl oxygen atom of the substrate prior to attack, has been proposed in opposition to the widely accepted mechanism of direct nucleophilic reaction. We have assessed the SAC proposal for the hydrolysis of three representative phosphate monoester dianions (2,4-dinitrophenyl phosphate, phenyl phosphate, and methyl phosphate) by considering the reactivity of the hydroxide ion toward the phosphorus center of the corresponding singly protonated monoesters. The reliability of the calculations was verified by comparing the calculated and the observed values of the activation free energies for the analogous S(N)2(P) reactions of F- with the monoanion of the monoester 2,4-dinitrophenyl phosphate and its diester analogue, methyl 2,4-dinitrophenyl phosphate. It was found that the orientation of the phosphate hydrogen atom has important implications with regard to the nature of the transition state. Hard nucleophiles such as OH- and F- can attack the phosphorus atom of a singly protonated phosphate monoester only if the phosphate hydrogen atom is oriented toward the leaving-group oxygen atom. As a result of this proton orientation, the SAC mechanism in solution is characterized by a small Brønsted coefficient value (beta(lg)=-0.25). This mechanism is unlikely to apply to aryl phosphates, but becomes a likely possibility for alkyl phosphate esters. If oxyanionic nucleophiles of pK(a)<11 are involved, as in alkaline phosphatase, then the S(N)2(P) reaction may proceed with the phosphate hydrogen atom oriented toward the nucleophile. In this situation, a large negative value of beta(lg) (-0.95) is predicted for the substrate-assisted catalysis mechanism.
量子化学方法与连续介质溶剂化模型相结合,已被用于评估最近提出的磷酸单酯二阴离子水解的底物辅助催化(SAC)机制。SAC机制是指在亲核试剂进攻之前,亲核试剂中的一个质子转移到底物的非桥连磷酰氧原子上,该机制的提出与广泛接受的直接亲核反应机制相反。我们通过考虑氢氧根离子对相应单质子化单酯磷中心的反应活性,评估了三种代表性磷酸单酯二阴离子(2,4-二硝基苯磷酸酯、苯磷酸酯和甲基磷酸酯)水解的SAC提议。通过比较F-与单酯2,4-二硝基苯磷酸酯的单阴离子及其二酯类似物2,4-二硝基苯磷酸甲酯的类似S(N)2(P)反应的计算活化自由能和观测值,验证了计算的可靠性。发现磷酸氢原子的取向对过渡态的性质有重要影响。只有当磷酸氢原子朝向离去基团氧原子时,诸如OH-和F-等硬亲核试剂才能进攻单质子化磷酸单酯的磷原子。由于这种质子取向,溶液中的SAC机制的特征是布朗斯特系数值较小(β(lg)=-0.25)。该机制不太可能适用于芳基磷酸酯,但对于烷基磷酸酯来说成为一种可能的情况。如果涉及pK(a)<11的氧阴离子亲核试剂,如在碱性磷酸酶中,那么S(N)2(P)反应可能在磷酸氢原子朝向亲核试剂的情况下进行。在这种情况下,预测底物辅助催化机制的β(lg)为大的负值(-0.95)。